Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_P10
(287 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 54 1e-08
03_06_0479 + 34217170-34217172,34217337-34217786 53 4e-08
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 49 5e-07
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 48 1e-06
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 45 1e-05
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 45 1e-05
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 43 3e-05
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 42 8e-05
05_01_0103 + 686770-687017,687120-687270 41 2e-04
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 37 0.003
04_03_0226 - 12977443-12977895 28 1.4
10_08_0472 - 18154797-18155048,18155332-18156318,18156424-181565... 27 1.8
01_01_0612 + 4565422-4565481,4565597-4565671,4565760-4566332,456... 27 1.8
04_01_0238 - 3095098-3095466,3097496-3097526,3098082-3098527 27 3.2
04_01_0190 - 2234038-2234674,2237128-2237665,2239294-2239378 27 3.2
07_03_1506 - 27161056-27161454 26 4.2
07_03_0124 - 13723597-13724657,13726179-13726413 26 4.2
07_03_1723 - 29038701-29039213,29039341-29039413,29039504-290395... 26 5.6
04_01_0137 - 1549562-1550213,1553363-1553896,1554524-1554606 26 5.6
02_02_0260 + 8385014-8385279,8385695-8385809 26 5.6
10_06_0124 + 11013346-11013474,11013879-11013939,11014751-110148... 25 7.4
02_04_0393 - 22581651-22582046,22582191-22582196 25 7.4
03_06_0040 + 31240164-31241102,31241280-31241897 25 9.8
02_05_1272 + 35373843-35374031,35374343-35374490,35374586-353747... 25 9.8
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 54.4 bits (125), Expect = 1e-08
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +3
Query: 57 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 233
+SG+ V+ CK T+ E+++ K HRYV+F I D+ K++ VE G +D F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPE-- 68
Query: 234 TGECRY 251
+CRY
Sbjct: 69 -SDCRY 73
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 52.8 bits (121), Expect = 4e-08
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +3
Query: 60 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGGT 236
SGV VS+ CK ++E++ + HR+VVF I D +Q+ V+ VG R+A +D L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64
Query: 237 GECRY 251
CRY
Sbjct: 65 --CRY 67
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 49.2 bits (112), Expect = 5e-07
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +3
Query: 57 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 233
+SGV + D CK + E++ + HR++ F + ++ K+I V+ +G R Y+ F L +
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPE-- 81
Query: 234 TGECRY 251
G+CR+
Sbjct: 82 -GDCRF 86
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 48.0 bits (109), Expect = 1e-06
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 45 HQKMASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGGRNAEYDSFLEDL 221
H +SG+ V+ + T+ E++ K RYV+F I + +KQ+ VE G YD FL L
Sbjct: 7 HSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASL 66
Query: 222 QKGGTGECRY 251
+ +CRY
Sbjct: 67 PE---NDCRY 73
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 44.8 bits (101), Expect = 1e-05
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 57 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 233
ASG+ V D CK ++E+K + R++ F I + +Q+ V+ +G YD F +
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325
Query: 234 TGECRY 251
ECRY
Sbjct: 326 ASECRY 331
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 44.8 bits (101), Expect = 1e-05
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 57 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGG 233
ASG+ V D CK + E+K + R++VF I ++ +Q+ V+ +G YD F L
Sbjct: 24 ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80
Query: 234 TGECRY 251
ECRY
Sbjct: 81 ADECRY 86
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 43.2 bits (97), Expect = 3e-05
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 66 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGGRNAEYDSFLEDLQKGGTGE 242
+ V + K+ + E+K+ K HRYV+F I D + +I VE G YD F L +
Sbjct: 20 IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADD 76
Query: 243 CRY 251
CRY
Sbjct: 77 CRY 79
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 41.9 bits (94), Expect = 8e-05
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 63 GVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGGRNAEYDSFLEDLQKGGTG 239
G+ V+D CK ++E+K + R++VF I D+ +I VE +G Y+ F L
Sbjct: 13 GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 240 ECRY 251
ECRY
Sbjct: 70 ECRY 73
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 40.7 bits (91), Expect = 2e-04
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 66 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGGRNAEYDSFLEDLQKGGTGE 242
+ V D CK + E+K + +R++++ I ++K+ + VE VG YD F L E
Sbjct: 1 MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57
Query: 243 CRY 251
CRY
Sbjct: 58 CRY 60
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 66 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGGRNAEYDSFLEDL 221
+ V + K+ + E+ + K HRYV+F I D + +I VE G YD F L
Sbjct: 40 IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASL 92
>04_03_0226 - 12977443-12977895
Length = 150
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 144 IRDEKQIDVETVGGRNAEYDSFLEDLQKGG 233
+R+E +D+E GG AE + DL+ GG
Sbjct: 112 MREEAAVDLEPGGGGGAEEEEAAVDLEPGG 141
>10_08_0472 -
18154797-18155048,18155332-18156318,18156424-18156546,
18156654-18156808,18157611-18157824,18158977-18159077,
18159162-18159285,18159584-18159655,18159897-18159961,
18160167-18160233,18160917-18161015,18161099-18161167,
18161286-18161409,18162507-18162566,18163111-18163634
Length = 1011
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 275 CIPNRRRPISAFSGAALLQVFEKAIVFGITSADGFDVD 162
CIP + + A ++FEK +V I+S DG+D +
Sbjct: 538 CIP--QETVDAVHSEICGKLFEKVVVEAISSVDGYDTN 573
>01_01_0612 +
4565422-4565481,4565597-4565671,4565760-4566332,
4566438-4566551,4566676-4567377
Length = 507
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 144 IRDEKQIDVETVGGR-NAEYDSFLEDLQKGGT 236
+RDEK++DV +GG ++SF Q+ T
Sbjct: 10 VRDEKKVDVAAIGGAPPIVFESFAPSTQRDST 41
>04_01_0238 - 3095098-3095466,3097496-3097526,3098082-3098527
Length = 281
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 109 KRIRNTATWCSTFATRNRSTSKPSADVM 192
+R+ WCS F T++R + + + DV+
Sbjct: 222 ERVIMLGLWCSAFETKHRPSMRQAMDVL 249
>04_01_0190 - 2234038-2234674,2237128-2237665,2239294-2239378
Length = 419
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 133 WCSTFATRNRSTSKPSADVM 192
WCS F T++R T + + DV+
Sbjct: 368 WCSAFETQHRPTMQKAMDVL 387
>07_03_1506 - 27161056-27161454
Length = 132
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 144 IRDEKQIDVETVGGRNAEYDSFLEDLQK 227
+RD++ TVGGRN D ED K
Sbjct: 50 VRDDEDDGAPTVGGRNGGADEVDEDAAK 77
>07_03_0124 - 13723597-13724657,13726179-13726413
Length = 431
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 123 VSYPFLFLRMSFCKRPILSHQTPFFDVKHVKIAPLI 16
+ YP +++ SF PILS F +++K+ P +
Sbjct: 226 IFYPLMWIMTSFAVVPILSGTMFCFQTQYLKLDPSV 261
>07_03_1723 -
29038701-29039213,29039341-29039413,29039504-29039594,
29039684-29039741,29039829-29039905,29040004-29040214,
29040339-29040386,29042496-29042608,29043270-29043341,
29044372-29046336,29046434-29046641,29046847-29047165,
29047813-29047937,29048024-29048157,29049089-29049164,
29049276-29049428,29049829-29050532,29050636-29050811,
29050945-29051107,29051199-29051341,29051802-29051914,
29053113-29053237,29053867-29054016,29054753-29054921,
29055201-29055418,29055499-29055709
Length = 2135
Score = 25.8 bits (54), Expect = 5.6
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Frame = -1
Query: 281 DACIPNRRRPISAFSG-----AALLQVFEKAI 201
DACI + RP+S F G LLQ+F+ I
Sbjct: 747 DACITFQERPLSMFEGDLQNFLELLQIFKNKI 778
>04_01_0137 - 1549562-1550213,1553363-1553896,1554524-1554606
Length = 422
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 133 WCSTFATRNRSTSKPSADVM 192
WCS F T++R T + DV+
Sbjct: 352 WCSVFETKHRPTMLQAMDVL 371
>02_02_0260 + 8385014-8385279,8385695-8385809
Length = 126
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 124 TATWCSTFATRNRSTSKPSADVMPNTIAFSKTCRR 228
T TWCS F S +K + +M +A S + R
Sbjct: 84 TTTWCSLFKITKTSITKHGSALMDRALAGSWSTSR 118
>10_06_0124 +
11013346-11013474,11013879-11013939,11014751-11014838,
11017619-11017806,11017849-11018112,11018188-11018262,
11018263-11019698
Length = 746
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 109 KRIRNTATWCSTFATRNRSTSKPSA 183
K +R WC + RN+S S SA
Sbjct: 534 KNLRKVKIWCKSATKRNKSISLSSA 558
>02_04_0393 - 22581651-22582046,22582191-22582196
Length = 133
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 66 VTVSDACKTTYEEIKKDKKHRYVVFY 143
V VSDA K EE KK ++ +V+Y
Sbjct: 69 VEVSDASKKKEEEAKKKEEKEELVYY 94
>03_06_0040 + 31240164-31241102,31241280-31241897
Length = 518
Score = 25.0 bits (52), Expect = 9.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 157 NRSTSKPSADVMPNTIAFSKTCRRAAPE 240
NR + S V+ IA SKT RR AP+
Sbjct: 176 NRRLFELSLSVLMEAIAQSKTTRREAPD 203
>02_05_1272 +
35373843-35374031,35374343-35374490,35374586-35374704,
35374992-35375121,35375122-35375201
Length = 221
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 73 YRTLAKRHTKK*KRIRNTATWCSTFATRNRSTSKPSA 183
Y + + H R+R+T W S + NR PS+
Sbjct: 112 YLAIIEYHKPTKPRVRHTRPWSSCTKSSNRGNFHPSS 148
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,678,775
Number of Sequences: 37544
Number of extensions: 133761
Number of successful extensions: 438
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 304131700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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