Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_P10
(287 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 2.3
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 2.3
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 21 3.0
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 4.0
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 20 7.0
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 20 7.0
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 20 7.0
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 20 7.0
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 19 9.2
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 19 9.2
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 19 9.2
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 19 9.2
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.4 bits (43), Expect = 2.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 262 EDDQYLHSPVPPFCRSSRKL 203
+D YL P PPFC + KL
Sbjct: 75 KDLVYLE-PSPPFCEKNPKL 93
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.4 bits (43), Expect = 2.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 262 EDDQYLHSPVPPFCRSSRKL 203
+D YL P PPFC + KL
Sbjct: 76 KDLVYLE-PSPPFCEKNPKL 94
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 21.0 bits (42), Expect = 3.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 269 PNRRRPISAFSGAALLQV 216
P +RP +AFSG L ++
Sbjct: 18 PEEKRPRTAFSGEQLARL 35
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 20.6 bits (41), Expect = 4.0
Identities = 16/57 (28%), Positives = 21/57 (36%)
Frame = +3
Query: 81 ACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGGRNAEYDSFLEDLQKGGTGECRY 251
+C K+K RY Y EK ++ T R Y E QK E +Y
Sbjct: 3 SCSKDRNREYKEKDRRYEKLYNEKEKLLEERTSRKR---YSRSREREQKSYKNERKY 56
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 19.8 bits (39), Expect = 7.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 197 FGITSADGFDVDL 159
FG + DGF VDL
Sbjct: 167 FGSWTYDGFQVDL 179
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 19.8 bits (39), Expect = 7.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 197 FGITSADGFDVDLFLVANVE 138
FG + DG+ VDL +A E
Sbjct: 163 FGSWTYDGYTVDLRHLAQTE 182
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 19.8 bits (39), Expect = 7.0
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 105 FLRMSFCKRPILSHQTPFFDVKHVKIAPLI 16
FL +S C RP + P +V PL+
Sbjct: 10 FLLLSSCTRPSRGNAVPSSQRGNVHNDPLV 39
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 19.8 bits (39), Expect = 7.0
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -3
Query: 105 FLRMSFCKRPILSHQTPFFDVKHVKIAPLI 16
FL +S C RP + P +V PL+
Sbjct: 10 FLLLSSCTRPSRGNAVPSSQRGNVHNDPLV 39
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 19.4 bits (38), Expect = 9.2
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -1
Query: 131 VAVFLILFYFFVCRFASVRYCHT 63
+ VFLI + F C YC T
Sbjct: 278 MGVFLICWVPFFCVNIVTSYCKT 300
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.4 bits (38), Expect = 9.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 197 FGITSADGFDVDL 159
FG + DGF VDL
Sbjct: 171 FGSWTYDGFKVDL 183
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 19.4 bits (38), Expect = 9.2
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 62 WCDSIGRLQNDIRRNKK 112
W +GR+ I RN+K
Sbjct: 390 WSRVLGRVHATIERNEK 406
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 19.4 bits (38), Expect = 9.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 69 TVSDACKTTYEEIKKDK 119
TV +AC EI KDK
Sbjct: 480 TVENACVLKNTEIFKDK 496
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,385
Number of Sequences: 438
Number of extensions: 1285
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5744526
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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