Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_P09
         (248 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   0.091
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   2.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   3.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    20   3.4  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    20   3.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    20   3.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   4.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    20   4.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    20   4.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    19   7.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    19   7.9  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 25.4 bits (53), Expect = 0.091
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 21  FSCYHCDLRWVSSNQTFAH 77
           + C HC +++  SNQ  AH
Sbjct: 219 YGCEHCSMKFSDSNQLKAH 237



 Score = 20.6 bits (41), Expect = 2.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 21  FSCYHCDLRWVSSNQTFAHPRV 86
           + C HCD ++V       H RV
Sbjct: 191 YRCEHCDRQFVQVANLRRHLRV 212


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 21  FSCYHCDLRWVSSNQTFAHPRV 86
           + C HCD ++V       H RV
Sbjct: 38  YRCEHCDRQFVQVANLRRHLRV 59


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 108 CCFLLFVIIVIGEDEG 155
           CC LL  I    E+EG
Sbjct: 9   CCLLLLGIAFAQEEEG 24


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 108 CCFLLFVIIVIGEDEG 155
           CC LL  I    E+EG
Sbjct: 9   CCLLLLGIAFAQEEEG 24


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 21  FSCYHCDLRWVSSNQTFAHPRVLS 92
           F C  CD R+  S+    H R  S
Sbjct: 50  FRCPVCDRRFSQSSSVTTHMRTHS 73


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 21  FSCYHCDLRWVSSNQTFAHPRVLS 92
           F C  CD R+  S+    H R  S
Sbjct: 306 FRCPVCDRRFSQSSSVTTHMRTHS 329


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.8 bits (39), Expect = 4.5
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -3

Query: 117 GNSIFINCV 91
           GNS+F+ C+
Sbjct: 428 GNSVFLKCI 436


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 19.8 bits (39), Expect = 4.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 203 IYHLPATHLG 232
           + HLP TH+G
Sbjct: 402 VAHLPNTHMG 411


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 19.8 bits (39), Expect = 4.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 203 IYHLPATHLG 232
           + HLP TH+G
Sbjct: 350 VAHLPNTHMG 359


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.0 bits (37), Expect = 7.9
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 186 WLXFFEYIIFLPRTW 230
           WL  F Y+I    TW
Sbjct: 123 WLLIFAYLIPEVGTW 137


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.0 bits (37), Expect = 7.9
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 186 WLXFFEYIIFLPRTW 230
           WL  F Y+I    TW
Sbjct: 123 WLLIFAYLIPEVGTW 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,177
Number of Sequences: 336
Number of extensions: 987
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3737755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)