Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_P03
         (419 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.23 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   1.6  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   4.9  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   4.9  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   4.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = -1

Query: 254 DCCAHGH----IVYRRSPKLAIGRTVCLVRSLANQQIVLGGLRSLGHRK 120
           +C AHG+    I++ RS   A+G    L + LAN  +V    R+  +R+
Sbjct: 44  ECSAHGNPTPDIIWVRSDGTAVGDVPGLRQVLANGNLVFPPFRAEDYRQ 92


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 10/42 (23%), Positives = 21/42 (50%)
 Frame = -3

Query: 147 WSSKSWPP*ERSMRPLSPRALHEK*WNTTLGMINILFLDSPC 22
           W  K W     +++ L  R + +  +   L +IN+L++ + C
Sbjct: 75  WKKKYWSEFLANLKLLKGRKIRKNLYYLLLFVINVLYVLTLC 116


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 336 LHDIRAKSASVFYEA 380
           LHD++ ++ SV Y+A
Sbjct: 85  LHDLKGRTTSVPYDA 99


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 336 LHDIRAKSASVFYEA 380
           LHD++ ++ SV Y+A
Sbjct: 85  LHDLKGRTTSVPYDA 99


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 336 LHDIRAKSASVFYEA 380
           LHD++ ++ SV Y+A
Sbjct: 85  LHDLKGRTTSVPYDA 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,515
Number of Sequences: 336
Number of extensions: 1883
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)