SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_O24
         (155 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456342-1|CAG30228.1|  605|Homo sapiens Em:AC002472.7 protein.        29   3.6  
CR450354-1|CAG29350.1|  137|Homo sapiens NDUFB7 protein.               29   3.6  
BC032485-1|AAH32485.1|  598|Homo sapiens apoptosis-inducing fact...    29   3.6  
BC002595-1|AAH02595.1|  137|Homo sapiens NADH dehydrogenase (ubi...    29   3.6  
AL834438-1|CAD39098.1| 1097|Homo sapiens hypothetical protein pr...    29   3.6  
AL772337-4|CAI23630.2| 1445|Homo sapiens chromosome 9 open readi...    29   3.6  
AK125845-1|BAC86315.1| 1445|Homo sapiens protein ( Homo sapiens ...    29   3.6  
AK094844-1|BAC04434.1|  604|Homo sapiens protein ( Homo sapiens ...    29   3.6  
AK055035-1|BAB70841.1|  605|Homo sapiens protein ( Homo sapiens ...    29   3.6  
AF217091-1|AAF91223.1|  137|Homo sapiens NADH:ubiquinoe oxidored...    29   3.6  
AF112200-1|AAF17188.1|  137|Homo sapiens NADH-oxidoreductase B18...    29   3.6  
BC065482-1|AAH65482.1|  842|Homo sapiens oxysterol binding prote...    28   4.8  
AF392446-1|AAL40659.1|  842|Homo sapiens oxysterol-binding prote...    28   4.8  
AF323729-1|AAG53410.1|  842|Homo sapiens OSBP-related protein 7 ...    28   4.8  
AB208886-1|BAD92123.1|  452|Homo sapiens oxysterol-binding prote...    28   4.8  
AK223570-1|BAD97290.1|  594|Homo sapiens thioesterase, adipose a...    27   8.4  

>CR456342-1|CAG30228.1|  605|Homo sapiens Em:AC002472.7 protein.
          Length = 605

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 117 PGSCPPSHCSNVGGSLDDIFTVRTPAVSNRL 25
           PGS P +  S  G  ++++FT+RTP  +NR+
Sbjct: 297 PGSSPKT-LSCKGKEVENVFTIRTPEDANRV 326


>CR450354-1|CAG29350.1|  137|Homo sapiens NDUFB7 protein.
          Length = 137

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 143 PPESKIFGFPEAARRAIVVTSADR*MTYLRLELRRY 36
           PP+   +GFPE   R +V T  +     LRL+LR Y
Sbjct: 26  PPD---YGFPERKEREMVATQQEMMDAQLRLQLRDY 58


>BC032485-1|AAH32485.1|  598|Homo sapiens apoptosis-inducing factor,
           mitochondrion-associated, 3 protein.
          Length = 598

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 117 PGSCPPSHCSNVGGSLDDIFTVRTPAVSNRL 25
           PGS P +  S  G  ++++FT+RTP  +NR+
Sbjct: 297 PGSSPKT-LSCKGKEVENVFTIRTPEDANRV 326


>BC002595-1|AAH02595.1|  137|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 beta subcomplex, 7, 18kDa protein.
          Length = 137

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 143 PPESKIFGFPEAARRAIVVTSADR*MTYLRLELRRY 36
           PP+   +GFPE   R +V T  +     LRL+LR Y
Sbjct: 26  PPD---YGFPERKEREMVATQQEMMDAQLRLQLRDY 58


>AL834438-1|CAD39098.1| 1097|Homo sapiens hypothetical protein
           protein.
          Length = 1097

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 59  NMSSSDPPTLLQWLGGQLPGNQRFWTP 139
           NM++S  P  L W GG  PG Q   +P
Sbjct: 812 NMTASQGPCALLWKGGDSPGQQEPGSP 838


>AL772337-4|CAI23630.2| 1445|Homo sapiens chromosome 9 open reading
            frame 79 protein.
          Length = 1445

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 59   NMSSSDPPTLLQWLGGQLPGNQRFWTP 139
            NM++S  P  L W GG  PG Q   +P
Sbjct: 1160 NMTASQGPCALLWKGGDSPGQQEPGSP 1186


>AK125845-1|BAC86315.1| 1445|Homo sapiens protein ( Homo sapiens cDNA
            FLJ43857 fis, clone TESTI4007239. ).
          Length = 1445

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 59   NMSSSDPPTLLQWLGGQLPGNQRFWTP 139
            NM++S  P  L W GG  PG Q   +P
Sbjct: 1160 NMTASQGPCALLWKGGDSPGQQEPGSP 1186


>AK094844-1|BAC04434.1|  604|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37525 fis, clone BRCAN2009156, moderately
           similar to Xenopus laevis mRNA for Nfrl. ).
          Length = 604

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 117 PGSCPPSHCSNVGGSLDDIFTVRTPAVSNRL 25
           PGS P +  S  G  ++++FT+RTP  +NR+
Sbjct: 303 PGSSPKT-LSCKGKEVENVFTIRTPEDANRV 332


>AK055035-1|BAB70841.1|  605|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30473 fis, clone BRAWH1000094, moderately
           similar to Xenopus laevis mRNA for Nfrl. ).
          Length = 605

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 117 PGSCPPSHCSNVGGSLDDIFTVRTPAVSNRL 25
           PGS P +  S  G  ++++FT+RTP  +NR+
Sbjct: 297 PGSSPKT-LSCKGKEVENVFTIRTPEDANRV 326


>AF217091-1|AAF91223.1|  137|Homo sapiens NADH:ubiquinoe
           oxidoreductase NDUFB7 subunit protein.
          Length = 137

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 143 PPESKIFGFPEAARRAIVVTSADR*MTYLRLELRRY 36
           PP+   +GFPE   R +V T  +     LRL+LR Y
Sbjct: 26  PPD---YGFPERKEREMVATQQEMMDAQLRLQLRDY 58


>AF112200-1|AAF17188.1|  137|Homo sapiens NADH-oxidoreductase B18
           subunit protein.
          Length = 137

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 143 PPESKIFGFPEAARRAIVVTSADR*MTYLRLELRRY 36
           PP+   +GFPE   R +V T  +     LRL+LR Y
Sbjct: 26  PPD---YGFPERKEREMVATQQEMMDAQLRLQLRDY 58


>BC065482-1|AAH65482.1|  842|Homo sapiens oxysterol binding
           protein-like 7 protein.
          Length = 842

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 141 PGVQNLWFPGSCPPSHCSNVG 79
           PG Q +W P S PP H  N G
Sbjct: 715 PGGQCIWKPNSMPPDHERNFG 735


>AF392446-1|AAL40659.1|  842|Homo sapiens oxysterol-binding
           protein-like protein OSBPL7 protein.
          Length = 842

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 141 PGVQNLWFPGSCPPSHCSNVG 79
           PG Q +W P S PP H  N G
Sbjct: 715 PGGQCIWKPNSMPPDHERNFG 735


>AF323729-1|AAG53410.1|  842|Homo sapiens OSBP-related protein 7
           protein.
          Length = 842

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 141 PGVQNLWFPGSCPPSHCSNVG 79
           PG Q +W P S PP H  N G
Sbjct: 715 PGGQCIWKPNSMPPDHERNFG 735


>AB208886-1|BAD92123.1|  452|Homo sapiens oxysterol-binding
           protein-like protein 7 variant protein.
          Length = 452

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 141 PGVQNLWFPGSCPPSHCSNVG 79
           PG Q +W P S PP H  N G
Sbjct: 325 PGGQCIWKPNSMPPDHERNFG 345


>AK223570-1|BAD97290.1|  594|Homo sapiens thioesterase, adipose
           associated isoform BFIT2 variant protein.
          Length = 594

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 23  RRRLDTAGVLTVNMSSSDPPTLLQWLGGQLPGNQRFW 133
           RR +++A +  V + + D P LL W+  Q PG+   W
Sbjct: 313 RRHINSAFMTFVVLDADDQPQLLPWIRPQ-PGDGERW 348


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,083,631
Number of Sequences: 237096
Number of extensions: 420719
Number of successful extensions: 1274
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 76,859,062
effective HSP length: 31
effective length of database: 69,509,086
effective search space used: 1390181720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -