Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_O24
         (155 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   1.4  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           19   4.3  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           19   4.3  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    19   4.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          18   9.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      18   9.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              18   9.8  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = +2

Query: 62  MSSSDPPTLLQWL-GGQLP 115
           +++ DPP  + WL  GQ P
Sbjct: 634 VAAGDPPLTISWLKDGQSP 652


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 150 HTPPGVQNLWFPGSCPP 100
           H PPG ++L +    PP
Sbjct: 69  HKPPGPKDLVYLEPSPP 85


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 150 HTPPGVQNLWFPGSCPP 100
           H PPG ++L +    PP
Sbjct: 70  HKPPGPKDLVYLEPSPP 86


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 148 YSPRSPKSLVSRKLPAEPL 92
           Y P  P  L+   +PAE L
Sbjct: 12  YLPAGPPRLLGWNVPAEEL 30


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -1

Query: 137 ESKIFGFP 114
           + K+FGFP
Sbjct: 646 DDKVFGFP 653


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -1

Query: 137 ESKIFGFP 114
           + K+FGFP
Sbjct: 646 DDKVFGFP 653


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 5/9 (55%), Positives = 5/9 (55%)
 Frame = -3

Query: 129  NLWFPGSCP 103
            N W  G CP
Sbjct: 1482 NAWSDGGCP 1490


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,229
Number of Sequences: 438
Number of extensions: 738
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 31
effective length of database: 132,765
effective search space used:  2655300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)