Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_O23
         (217 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101283-1|AAI01284.1|  420|Homo sapiens SERINC5 protein protein.      29   2.7  
BC101282-1|AAI01283.1|  179|Homo sapiens SERINC5 protein protein.      29   2.7  
BC101281-1|AAI01282.1|  417|Homo sapiens SERINC5 protein protein.      29   2.7  
BC101280-1|AAI01281.1|  420|Homo sapiens SERINC5 protein protein.      29   2.7  
AF498273-1|AAP06800.1|  423|Homo sapiens developmentally regulat...    29   2.7  

>BC101283-1|AAI01284.1|  420|Homo sapiens SERINC5 protein protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
 Frame = -2

Query: 153 CIITLALCPRLR----SRFIYSSLHFYFIRNPYICLVIRYSKNITHKFK-HLP 10
           C +    CPR+R    +RF+Y+    YFI    +C ++  S  + HK K H+P
Sbjct: 19  CSLCCDCCPRIRQSLSTRFMYA---LYFILVVVLCCIM-MSTTVAHKMKEHIP 67


>BC101282-1|AAI01283.1|  179|Homo sapiens SERINC5 protein protein.
          Length = 179

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
 Frame = -2

Query: 153 CIITLALCPRLR----SRFIYSSLHFYFIRNPYICLVIRYSKNITHKFK-HLP 10
           C +    CPR+R    +RF+Y+    YFI    +C ++  S  + HK K H+P
Sbjct: 19  CSLCCDCCPRIRQSLSTRFMYA---LYFILVVVLCCIM-MSTTVAHKMKEHIP 67


>BC101281-1|AAI01282.1|  417|Homo sapiens SERINC5 protein protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
 Frame = -2

Query: 153 CIITLALCPRLR----SRFIYSSLHFYFIRNPYICLVIRYSKNITHKFK-HLP 10
           C +    CPR+R    +RF+Y+    YFI    +C ++  S  + HK K H+P
Sbjct: 19  CSLCCDCCPRIRQSLSTRFMYA---LYFILVVVLCCIM-MSTTVAHKMKEHIP 67


>BC101280-1|AAI01281.1|  420|Homo sapiens SERINC5 protein protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
 Frame = -2

Query: 153 CIITLALCPRLR----SRFIYSSLHFYFIRNPYICLVIRYSKNITHKFK-HLP 10
           C +    CPR+R    +RF+Y+    YFI    +C ++  S  + HK K H+P
Sbjct: 19  CSLCCDCCPRIRQSLSTRFMYA---LYFILVVVLCCIM-MSTTVAHKMKEHIP 67


>AF498273-1|AAP06800.1|  423|Homo sapiens developmentally regulated
           protein TPO1 protein.
          Length = 423

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
 Frame = -2

Query: 153 CIITLALCPRLR----SRFIYSSLHFYFIRNPYICLVIRYSKNITHKFK-HLP 10
           C +    CPR+R    +RF+Y+    YFI    +C ++  S  + HK K H+P
Sbjct: 19  CSLCCDCCPRIRQSLSTRFMYA---LYFILVVVLCCIM-MSTTVAHKMKEHIP 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,669,333
Number of Sequences: 237096
Number of extensions: 466222
Number of successful extensions: 592
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 76,859,062
effective HSP length: 50
effective length of database: 65,004,262
effective search space used: 1365089502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)