Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_O22
         (221 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    23   1.7  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    21   3.9  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    21   6.8  

>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 210 PMTAGFIGLGYL 175
           P T+GFIGLG L
Sbjct: 340 PPTSGFIGLGLL 351


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = +2

Query: 131 TFNHSWETVAQAAWRKYPN 187
           T +H W       W KY N
Sbjct: 323 TSDHGWALGEHGEWAKYSN 341


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 178 FAPCCLCNRLPRMIESM 128
           FAP   C R P  +ES+
Sbjct: 944 FAPSAECPRCPGSVESV 960


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,091
Number of Sequences: 2352
Number of extensions: 2139
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 51
effective length of database: 444,027
effective search space used:  9768594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)