Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_O22
         (221 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   1.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   1.8  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    21   1.8  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      20   3.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    19   5.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    19   5.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      19   9.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   9.5  

>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 1.8
 Identities = 8/28 (28%), Positives = 10/28 (35%)
 Frame = +2

Query: 134 FNHSWETVAQAAWRKYPNPMNPAVIGTD 217
           F+  W       W +Y    N    GTD
Sbjct: 178 FSLGWTIAPMFGWNRYVPEGNMTACGTD 205


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 1.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 96  EHTL*RFGHQNILSIILGRRLHKQH 170
           E  L    H N L+ I   R++KQH
Sbjct: 288 EEPLTTIQHNNCLTRIPSTRINKQH 312


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 21.0 bits (42), Expect = 1.8
 Identities = 8/28 (28%), Positives = 10/28 (35%)
 Frame = +2

Query: 134 FNHSWETVAQAAWRKYPNPMNPAVIGTD 217
           F+  W       W +Y    N    GTD
Sbjct: 54  FSLGWTIAPMFGWNRYVPEGNMTACGTD 81


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 20.2 bits (40), Expect = 3.1
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +2

Query: 107 MKIWTSEHTFNHSWETVAQAAWRKYPNP 190
           + I+ S H  +H      Q+ +  Y NP
Sbjct: 67  LPIYQSHHHLHHHQVLYQQSPYLMYENP 94


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 19.4 bits (38), Expect = 5.5
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 116 WTSEHTFNHSW 148
           W+S HT + +W
Sbjct: 496 WSSTHTLDVAW 506


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 19.4 bits (38), Expect = 5.5
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +2

Query: 116 WTSEHTFNHSW 148
           W+S HT + +W
Sbjct: 534 WSSTHTLDVAW 544


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 175 APCCLCNRLPRMIESM 128
           A C LC+++ R + S+
Sbjct: 402 AVCALCHKVFRTLNSL 417


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 4/7 (57%), Positives = 5/7 (71%)
 Frame = -2

Query: 208 YDSWIHW 188
           Y+ W HW
Sbjct: 859 YEDWRHW 865


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,588
Number of Sequences: 438
Number of extensions: 666
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3407265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)