Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_O21
         (433 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   1.5  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   1.5  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   1.5  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   1.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   3.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   3.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   3.4  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    21   5.9  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   5.9  

>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 73  EGWKEREKDRKEGTTQEE 126
           E WKER +DR E     E
Sbjct: 61  ETWKERSRDRTERERSRE 78


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 73  EGWKEREKDRKEGTTQEE 126
           E WKER +DR E     E
Sbjct: 61  ETWKERSRDRTERERSRE 78


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 73  EGWKEREKDRKEGTTQEE 126
           E WKER +DR E     E
Sbjct: 61  ETWKERSRDRTERERSRE 78


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 73  EGWKEREKDRKEGTTQEE 126
           E WKER +DR E     E
Sbjct: 61  ETWKERSRDRTERERSRE 78


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +1

Query: 277 STISGVWVWRGHELAFPLS--PDWQIDYE 357
           +TI+GVW+  G   + PL+   DW  + E
Sbjct: 155 ATIAGVWILSGAISSPPLAGWNDWPEELE 183


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +1

Query: 277 STISGVWVWRGHELAFPLS--PDWQIDYE 357
           +TI+GVW+  G   + PL+   DW  + E
Sbjct: 155 ATIAGVWILSGAISSPPLAGWNDWPEELE 183


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +1

Query: 277 STISGVWVWRGHELAFPLS--PDWQIDYE 357
           +TI+GVW+  G   + PL+   DW  + E
Sbjct: 155 ATIAGVWILSGAISSPPLAGWNDWPEELE 183


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 82  KEREKDRKEGTTQEEGRACRTRY 150
           KER +DR+E     E R   + Y
Sbjct: 297 KERSRDRRERGRSREHRIIPSHY 319


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 11/28 (39%), Positives = 12/28 (42%)
 Frame = -3

Query: 347 ICQSGESGKASSWPRQTHTPEMVESLSP 264
           IC S  S  A  W R   T E+ E   P
Sbjct: 172 ICSSAISFPAIVWWRAVRTEEVPEDKCP 199


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,894
Number of Sequences: 438
Number of extensions: 1318
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)