Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_O20
         (181 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ...    29   0.58 
Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical pr...    27   1.3  
AF016686-2|AAB66239.2|  399|Caenorhabditis elegans Hypothetical ...    27   1.8  
Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical pr...    26   4.1  
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr...    26   4.1  
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr...    26   4.1  
AL031627-22|CAI79188.1|  213|Caenorhabditis elegans Hypothetical...    25   7.1  
AF025465-9|AAB71020.2|  136|Caenorhabditis elegans Hypothetical ...    25   7.1  

>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
           protein Y39G8C.1 protein.
          Length = 1195

 Score = 28.7 bits (61), Expect = 0.58
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +1

Query: 34  IRDVDQDQAFYKTVEMYQFEANDLITK--MIEEKNHAGGQNVYGANDDDDE 180
           IR VD +Q      E+  FE++D+  +    E K+ AGG    GA DD+D+
Sbjct: 375 IRVVDPEQQELAEPELVAFESSDVEDEAGAEESKDEAGGA---GAEDDEDD 422


>Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical
           protein C16C10.3 protein.
          Length = 1032

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 61  FYKTVEMYQFEANDLITKMIEEKNHAGGQNVYGANDDDD 177
           FYK   + +F +N    K+ E K   GG+  YG +D  D
Sbjct: 285 FYKDTSVIKFSSN----KLSEMKGGGGGRGGYGRSDSRD 319


>AF016686-2|AAB66239.2|  399|Caenorhabditis elegans Hypothetical
           protein R07C3.10 protein.
          Length = 399

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +1

Query: 31  LIRDVDQDQAFYKTVEMYQFEANDLITKM--IEEKNHAGG 144
           LIR +D     YK  +M   E N+ ITKM   EEK  A G
Sbjct: 90  LIRGIDYFDFQYKAEKMRIKEENEKITKMDDSEEKKRARG 129


>Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical
           protein F58G11.2 protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +1

Query: 19  VVTTLIRDVDQDQAFYKTVEMYQFEANDLITKMIEEKNHAGGQNVYGANDDDDE 180
           VVTT+ R +D         E+Y    +         ++H GGQ+ Y A  +D++
Sbjct: 175 VVTTMTR-LDHINRIEILTEVYSPRDHHNYNSQSSPRSHQGGQDRYSAPKEDNQ 227


>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
           protein F59A2.6 protein.
          Length = 1133

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 112 KMIEEKNHAGGQNVYGANDDDDE 180
           K++EE+ H G Q   GA DD ++
Sbjct: 373 KVVEEEKHTGIQRAQGALDDAEK 395


>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
           protein F59A2.6 protein.
          Length = 1133

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 112 KMIEEKNHAGGQNVYGANDDDDE 180
           K++EE+ H G Q   GA DD ++
Sbjct: 373 KVVEEEKHTGIQRAQGALDDAEK 395


>AL031627-22|CAI79188.1|  213|Caenorhabditis elegans Hypothetical
           protein Y102A5C.36 protein.
          Length = 213

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 99  ICFKLIHFYSFIKCLILIYISNQSCNYSIK 10
           +CF +  F SFI  + L++ + + C  + K
Sbjct: 18  LCFFVFPFVSFIILMFLVFFTGKKCLSAFK 47


>AF025465-9|AAB71020.2|  136|Caenorhabditis elegans Hypothetical
           protein K02E7.11 protein.
          Length = 136

 Score = 25.0 bits (52), Expect = 7.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -2

Query: 132 VFLFNHFCY*IICFKLIHFYSFIKCLILIYISNQSCNYSIK 10
           V  F +FC  II    I+  + I C++  +++  S  Y IK
Sbjct: 91  VITFIYFCKLIILLVSINMVTSILCIVCNFVNFCSVFYEIK 131


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.315    0.134    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,097,737
Number of Sequences: 27780
Number of extensions: 45114
Number of successful extensions: 153
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 12,740,198
effective HSP length: 40
effective length of database: 11,628,998
effective search space used: 220950962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)