Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_O20
         (181 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    22   0.78 
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   1.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   4.1  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    19   5.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       19   5.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    19   7.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    19   7.2  

>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 0.78
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 67  KTVEMYQFEANDLITKMIEEKNHAGGQNVY 156
           K   +Y+F  N+L+  +   K+      VY
Sbjct: 103 KVTRLYEFSDNELLVHISTNKSDVKATRVY 132


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.0 bits (42), Expect = 1.4
 Identities = 10/49 (20%), Positives = 23/49 (46%)
 Frame = +1

Query: 28  TLIRDVDQDQAFYKTVEMYQFEANDLITKMIEEKNHAGGQNVYGANDDD 174
           T++  +D+  +     + Y FE    +  ++  ++H   Q+ + A D D
Sbjct: 429 TVMSGLDESLSDVTPRKKYPFELEKALHNVMFIQHHIQRQDEFNAEDQD 477


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -2

Query: 66  IKCLILIYISNQSCN 22
           +KC ++ +  N++CN
Sbjct: 82  LKCSLVEFSENKNCN 96


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +1

Query: 133 HAGGQNVYGANDD 171
           H+  +N++G ND+
Sbjct: 94  HSERRNIFGENDE 106


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +3

Query: 135 CRWPKC-VWCQ 164
           C+WP C V C+
Sbjct: 283 CKWPGCEVICE 293


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = +1

Query: 31  LIRDVDQDQAFYKTVEMYQFEANDLITKMIEE 126
           L+  ++ D+        Y+F   D + K +EE
Sbjct: 131 LLFTIELDRVLESPRGKYEFSKYDKLKKKLEE 162


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = +1

Query: 31  LIRDVDQDQAFYKTVEMYQFEANDLITKMIEE 126
           L+  ++ D+        Y+F   D + K +EE
Sbjct: 146 LLFTIELDRVLESPRGKYEFSKYDKLKKKLEE 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.134    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,627
Number of Sequences: 438
Number of extensions: 512
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used:  2585220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.8 bits)