Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_O19
(286 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0479 + 3606663-3607448 77 3e-15
01_06_1461 - 37520885-37520965,37521366-37521461,37522160-37522297 37 0.003
03_04_0043 + 16747103-16747137,16747237-16747259,16748735-167488... 32 0.062
05_07_0342 + 29402867-29402906,29403012-29403052,29403146-294032... 31 0.11
08_01_0328 + 2959014-2959055,2959336-2959398,2960871-2960949,296... 31 0.14
02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619 30 0.25
05_03_0462 - 14316486-14316602,14316689-14316793,14318406-143184... 29 0.44
01_07_0305 - 42631214-42631330,42631423-42631527,42633208-426332... 29 0.58
05_04_0169 - 18694418-18694453,18694516-18694627,18696095-186962... 29 0.76
02_05_0887 + 32516255-32517292 29 0.76
02_03_0090 - 15100386-15100414,15100740-15100827,15101025-151010... 28 1.0
02_01_0209 - 1399613-1399622,1399719-1399764,1399849-1399927,140... 28 1.0
07_03_1222 - 24983294-24983356,24983695-24983858,24985209-249852... 28 1.3
11_02_0056 + 7828453-7828717,7829425-7829427,7829658-7829912,782... 26 4.1
08_02_0957 + 23033602-23034749,23035519-23035765,23036598-230367... 26 5.4
12_02_0001 - 12066231-12066341,12066745-12066825,12067056-120671... 25 7.1
06_03_1231 + 28580006-28580934,28581810-28582086 25 7.1
01_06_1245 - 35693949-35694038,35694974-35695070,35695170-356952... 25 7.1
05_02_0001 - 5472040-5472424,5472560-5472972 25 9.4
01_07_0288 + 42534552-42534558,42535302-42537280,42537367-425375... 25 9.4
>07_01_0479 + 3606663-3607448
Length = 261
Score = 76.6 bits (180), Expect = 3e-15
Identities = 36/64 (56%), Positives = 48/64 (75%), Gaps = 2/64 (3%)
Frame = +3
Query: 99 MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEELRKI-KSKNTK-T 272
M+ K +KM Q +NYR+RV +QD R +G F AFD+HMNL+LGDCEE RK+ SK++K T
Sbjct: 1 MSNPKGSKMLQFVNYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPSKSSKTT 60
Query: 273 ADRE 284
+RE
Sbjct: 61 GERE 64
>01_06_1461 - 37520885-37520965,37521366-37521461,37522160-37522297
Length = 104
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 135 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEL 242
++ R+ V L+ R G A+D+H+N+ILGD EE+
Sbjct: 27 LDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEI 62
>03_04_0043 +
16747103-16747137,16747237-16747259,16748735-16748856,
16748980-16749042
Length = 80
Score = 32.3 bits (70), Expect = 0.062
Identities = 11/45 (24%), Positives = 30/45 (66%)
Frame = +3
Query: 108 GKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEL 242
G+ ++++++ ++++ L +R +GT + FD+ MNL++ + E+
Sbjct: 5 GQPPDLKKYMDKKLQIKLNANRVIVGTLRGFDQFMNLVVDNTVEV 49
>05_07_0342 +
29402867-29402906,29403012-29403052,29403146-29403220,
29403523-29403648,29404195-29404247,29404385-29404475
Length = 141
Score = 31.5 bits (68), Expect = 0.11
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 123 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 239
++ ++ + VI D R +GT + FD+ N+IL + E
Sbjct: 8 LESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHE 46
>08_01_0328 +
2959014-2959055,2959336-2959398,2960871-2960949,
2961038-2961083,2961566-2961671
Length = 111
Score = 31.1 bits (67), Expect = 0.14
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 123 MQQHINYRVRVIL--QDSRTFIGTFKAFDKHMNLILGDCEELRKIKSKNTKTADR 281
M Q I R+++ L Q G FD++MNL+L D EE+ +K K+ R
Sbjct: 10 MTQPIKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI-NVKKDTRKSLGR 63
>02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619
Length = 398
Score = 30.3 bits (65), Expect = 0.25
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 126 QQHINYRVRVILQDSRTFIGTFKAFDKHMN 215
+Q++N + R + D +FIG++K KH+N
Sbjct: 152 RQYLNRKKRACMHDGCSFIGSYKELCKHVN 181
>05_03_0462 -
14316486-14316602,14316689-14316793,14318406-14318486,
14318593-14318610
Length = 106
Score = 29.5 bits (63), Expect = 0.44
Identities = 10/35 (28%), Positives = 23/35 (65%)
Frame = +3
Query: 138 NYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEL 242
N +V + ++++ +G +AFD+H N++L + E+
Sbjct: 31 NTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREM 65
>01_07_0305 -
42631214-42631330,42631423-42631527,42633208-42633216,
42635198-42636142,42636349-42636450,42637210-42637302
Length = 456
Score = 29.1 bits (62), Expect = 0.58
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +3
Query: 144 RVRVILQDSRTFIGTFKAFDKHMNLILGDCEEL 242
+V + Q+++ +G +AFD H N++L + E+
Sbjct: 383 KVLINCQNNKKLLGRVRAFDSHCNMVLENVREM 415
>05_04_0169 -
18694418-18694453,18694516-18694627,18696095-18696243,
18696980-18697033,18697110-18697222,18697323-18697374
Length = 171
Score = 28.7 bits (61), Expect = 0.76
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 135 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 239
I ++ VI++ + +GT FD ++N++L D E
Sbjct: 88 IGSKIWVIMKGDKELVGTLCGFDVYVNMVLEDVTE 122
>02_05_0887 + 32516255-32517292
Length = 345
Score = 28.7 bits (61), Expect = 0.76
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 126 QQHINYRVRVILQDSRTFIGTFKAFDKHM 212
+ ++N + R +QD +F+GT+K KH+
Sbjct: 149 RSYLNGKRRTCMQDGCSFVGTYKELRKHV 177
>02_03_0090 -
15100386-15100414,15100740-15100827,15101025-15101078,
15101184-15101243,15101352-15101462,15103213-15103287,
15103845-15103901
Length = 157
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +2
Query: 20 KLSVVGKTNLRKEIIYRKLLIQSVFQNDDRKE**NATTHQLSSQGNITRLAYLHRYIQ 193
++ VVG L + I + L+ ++ +R+E + H LS I Y + Y++
Sbjct: 99 RMQVVGDVYLDESISMKAYLLAPIYSGHEREEKTSLIAHSLSGWSAIIASEYFYDYLK 156
>02_01_0209 -
1399613-1399622,1399719-1399764,1399849-1399927,
1400004-1400162,1400988-1401050,1401154-1401222
Length = 141
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 192 KAFDKHMNLILGDCEELRKIKSKNTKTADR 281
K FD++MNL+L + EE+ IK K+ R
Sbjct: 97 KGFDEYMNLVLDEAEEI-NIKKDTRKSLGR 125
>07_03_1222 -
24983294-24983356,24983695-24983858,24985209-24985231,
24985340-24985374
Length = 94
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 153 VILQDSRTFIGTFKAFDKHMNLILGDCEEL 242
V L +R IGT + FD+ MNL++ + E+
Sbjct: 34 VKLNANRVVIGTLRGFDQFMNLVVDNTVEV 63
>11_02_0056 +
7828453-7828717,7829425-7829427,7829658-7829912,
7829997-7830124,7831063-7831207,7832178-7832275,
7833253-7833395,7835119-7835239,7835492-7835584,
7835712-7835828
Length = 455
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 144 RVRVILQDSRTFIGTFKAFDKHMNLILGDCEELRKIKSKNTKTADR 281
+V V LQD R F GT D+H ++ + + + S N ++ +
Sbjct: 217 KVSVTLQDGREFEGTVLNADRHSDIAVVKIKSKTPLPSANLGSSSK 262
>08_02_0957 +
23033602-23034749,23035519-23035765,23036598-23036744,
23036849-23037076
Length = 589
Score = 25.8 bits (54), Expect = 5.4
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +3
Query: 36 AKQI*EKK*FIVNC*YNPFSKMTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMN 215
AK + EKK I C + + + + + I V D+R + D H++
Sbjct: 446 AKILSEKKNHISVC--QTKTDEMVARLDSLDVEIGNHVSRCKADARLMKDELEKKDHHLS 503
Query: 216 LILGDCEELRKIKSKNTKTADRE 284
+ + EE KI K + A RE
Sbjct: 504 TVEKESEEFLKISEKKLEDAKRE 526
>12_02_0001 - 12066231-12066341,12066745-12066825,12067056-12067136,
12068017-12068097,12068337-12068417,12068492-12068572,
12068647-12068727,12070748-12070828,12070903-12070983,
12071551-12071631,12072036-12072116,12072519-12072599,
12072839-12072919,12073468-12073548,12074108-12074188,
12074428-12074508,12075076-12075156,12075396-12075476,
12075561-12075641,12076356-12076436,12076676-12076756,
12077326-12077406,12077811-12077891,12078131-12078211,
12078286-12078366,12079586-12079666,12079906-12079986,
12081341-12081421,12081793-12081873,12083074-12083154,
12083714-12083794,12084034-12084114,12084354-12084434,
12084674-12084754,12084829-12084909,12084984-12085064,
12085304-12085384,12087109-12087189,12087429-12087509,
12087584-12087664,12089204-12089284,12090339-12090419,
12090659-12090739,12091621-12091701,12092754-12092834,
12093074-12093154,12093155-12093310,12093550-12093630,
12094454-12094512,12094610-12094691,12096312-12096392,
12096789-12096869,12097768-12097907,12099296-12099377,
12100185-12100265,12100999-12101079,12101484-12101564,
12101814-12101894,12102628-12102708,12103744-12103824,
12104869-12104949,12105189-12105269,12105509-12105589,
12106322-12106402,12106477-12106557,12107448-12107528,
12108050-12108145,12109578-12109584,12110097-12110293
Length = 1929
Score = 25.4 bits (53), Expect = 7.1
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 111 KNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILG 227
K NK Q I + V + F G K F+KH N+I G
Sbjct: 1607 KFNKHQNMIFGHINVYWVGAMFFTG-MKKFNKHQNMIFG 1644
>06_03_1231 + 28580006-28580934,28581810-28582086
Length = 401
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 132 HINYRVRVILQDSRTFIGTFKAFDKH 209
H+N + R +D +F+G F KH
Sbjct: 128 HLNQKKRCCEEDCCSFVGNFNELQKH 153
>01_06_1245 -
35693949-35694038,35694974-35695070,35695170-35695232,
35696079-35696232,35696303-35696489,35697001-35697314,
35698079-35698220,35698445-35698656,35699068-35699244,
35699589-35699628,35700056-35700155,35701731-35701804
Length = 549
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 2 HEDFVHKLSVVGKTNLRKEIIYRKL 76
HE+ +HKL + K N K+++ RK+
Sbjct: 170 HEEKLHKLVMQSKINETKDVMRRKV 194
>05_02_0001 - 5472040-5472424,5472560-5472972
Length = 265
Score = 25.0 bits (52), Expect = 9.4
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 62 IYRKLL---IQSVFQNDDRKE**NATTHQLSSQG 154
+YR+LL I+ VF D ++ TTH L SQG
Sbjct: 165 LYRRLLQLGIKPVFLTDRTEDQRAVTTHNLLSQG 198
>01_07_0288 +
42534552-42534558,42535302-42537280,42537367-42537513,
42537982-42538526,42538906-42538981,42539357-42539437
Length = 944
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 117 YSFRSSFWKTDCIN 76
YSF SS W++D IN
Sbjct: 12 YSFNSSSWRSDVIN 25
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,017,537
Number of Sequences: 37544
Number of extensions: 95403
Number of successful extensions: 310
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 291966432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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