Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_O18
(303 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 128 6e-31
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 128 6e-31
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 128 6e-31
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 128 6e-31
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 128 6e-31
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 128 6e-31
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 128 6e-31
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 128 6e-31
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 127 1e-30
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 127 1e-30
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 127 1e-30
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 126 4e-30
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 122 5e-29
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 90 2e-19
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 60 2e-10
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 46 5e-06
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 40 3e-04
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 33 0.052
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 32 0.091
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 30 0.37
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 29 0.49
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 1.1
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 1.1
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 1.1
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 1.1
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 27 2.6
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 26 4.5
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 25 7.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 128 bits (310), Expect = 6e-31
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVXFSNVGRPRHQGVMVGMGQKDSYVGDEAQ 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV S VGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 SRRGI 303
S+RGI
Sbjct: 61 SKRGI 65
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 128 bits (310), Expect = 6e-31
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVXFSNVGRPRHQGVMVGMGQKDSYVGDEAQ 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV S VGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 SRRGI 303
S+RGI
Sbjct: 61 SKRGI 65
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 128 bits (310), Expect = 6e-31
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVXFSNVGRPRHQGVMVGMGQKDSYVGDEAQ 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV S VGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 SRRGI 303
S+RGI
Sbjct: 61 SKRGI 65
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 128 bits (310), Expect = 6e-31
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVXFSNVGRPRHQGVMVGMGQKDSYVGDEAQ 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV S VGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 SRRGI 303
S+RGI
Sbjct: 61 SKRGI 65
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 128 bits (310), Expect = 6e-31
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVXFSNVGRPRHQGVMVGMGQKDSYVGDEAQ 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV S VGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 SRRGI 303
S+RGI
Sbjct: 61 SKRGI 65
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 128 bits (310), Expect = 6e-31
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVXFSNVGRPRHQGVMVGMGQKDSYVGDEAQ 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV S VGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 SRRGI 303
S+RGI
Sbjct: 61 SKRGI 65
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 128 bits (310), Expect = 6e-31
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVXFSNVGRPRHQGVMVGMGQKDSYVGDEAQ 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV S VGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 SRRGI 303
S+RGI
Sbjct: 61 SKRGI 65
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 128 bits (310), Expect = 6e-31
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVXFSNVGRPRHQGVMVGMGQKDSYVGDEAQ 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAV S VGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 SRRGI 303
S+RGI
Sbjct: 61 SKRGI 65
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 127 bits (307), Expect = 1e-30
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVXFSNVGRPRHQGVMVGMGQKDSYVGDEAQ 288
MCD++VAALVVDNGSGMCKAGFAGDDAPRAV S VGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 SRRGI 303
S+RGI
Sbjct: 61 SKRGI 65
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 127 bits (307), Expect = 1e-30
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVXFSNVGRPRHQGVMVGMGQKDSYVGDEAQ 288
MCD++VAALVVDNGSGMCKAGFAGDDAPRAV S VGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 SRRGI 303
S+RGI
Sbjct: 61 SKRGI 65
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 127 bits (307), Expect = 1e-30
Identities = 59/65 (90%), Positives = 62/65 (95%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVXFSNVGRPRHQGVMVGMGQKDSYVGDEAQ 288
MCD++VAALVVDNGSGMCKAGFAGDDAPRAV S VGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 SRRGI 303
S+RGI
Sbjct: 61 SKRGI 65
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 126 bits (303), Expect = 4e-30
Identities = 57/65 (87%), Positives = 62/65 (95%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVXFSNVGRPRHQGVMVGMGQKDSYVGDEAQ 288
MCD++VAAL++DNGSGMCKAGFAGDDAPRAV S VGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 SRRGI 303
S+RGI
Sbjct: 61 SKRGI 65
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 122 bits (294), Expect = 5e-29
Identities = 57/63 (90%), Positives = 60/63 (95%)
Frame = +1
Query: 115 DEEVAALVVDNGSGMCKAGFAGDDAPRAVXFSNVGRPRHQGVMVGMGQKDSYVGDEAQSR 294
+EE+AALVVDNGSGMCKAGFAGDDAPRAV S VGRPRHQGVMVGMGQKDSYVGDEAQS+
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 295 RGI 303
RGI
Sbjct: 62 RGI 64
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 90.2 bits (214), Expect = 2e-19
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 163 KAGFAGDDAPRAVXFSNVGRPRHQGVMVGMGQKDSYVGDEAQSRRGI 303
+AGFAGDDAPRAV S VGRPRHQGVMVGMGQKDSYVGDEAQS+RGI
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 51
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 60.5 bits (140), Expect = 2e-10
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVXFSN-VGRPRHQGVMVGMGQKDSYVGDEAQSRRGI 303
+V+DNGSG+ KAGFAG+ P+ V F+N VGRP++ VM G D ++G +A+S RG+
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPK-VRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGL 67
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 46.0 bits (104), Expect = 5e-06
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1
Query: 241 MVGMGQKDSYVGDEAQSRRGI 303
MVGMGQKDSYVGDEAQS+RGI
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGI 21
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 39.9 bits (89), Expect = 3e-04
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVXFSNVGRP--RHQGVMVGMGQKDSYVGDEAQSRR 297
+VVDNG+G K G+AG + P + S VGRP R + + KD VG+E R
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLR 65
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 32.7 bits (71), Expect = 0.052
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPR-----------AVXFSNVGRPR-HQGVMVGM 252
M ++ A V+DNG+G K G+AG+ P+ V SN R + V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 253 GQKDSYVGDEAQS 291
D ++GDEA S
Sbjct: 61 DDLDFFIGDEALS 73
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 31.9 bits (69), Expect = 0.091
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -2
Query: 254 PMPTMTPW*RGRPTFEKXTARGASSPAKPALHIPDPL 144
P T TP RGRP ++ P P PDPL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 29.9 bits (64), Expect = 0.37
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 216 GATSSPGRHGRHGSEG 263
G + +PGRHGRHG+ G
Sbjct: 109 GPSGTPGRHGRHGAPG 124
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 29.5 bits (63), Expect = 0.49
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPR 195
+EV+ LV D GS + GFAG++ P+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPK 34
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 227 RGRPTFEKXTARGASSPAKPALHIPDPLSTTNAATSS 117
R P E+ + +SSPA P++ P P +T++ +TSS
Sbjct: 641 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 227 RGRPTFEKXTARGASSPAKPALHIPDPLSTTNAATSS 117
R P E+ + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 227 RGRPTFEKXTARGASSPAKPALHIPDPLSTTNAATSS 117
R P E+ + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 227 RGRPTFEKXTARGASSPAKPALHIPDPLSTTNAATSS 117
R P E+ + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 216 GATSSPGRHGRHGS 257
G PGRHGRHGS
Sbjct: 358 GPPHCPGRHGRHGS 371
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 103 FSMCDEEVAALVVDNGSGMCKAGFAGDDAPRAV 201
FS+ E+ V G +C +GF G D P V
Sbjct: 350 FSLKGEDYVLKVSQGGKTICLSGFMGIDLPERV 382
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -2
Query: 254 PMPTMTPW*RGRPTFEKXTARGASSPAKPALHIPDPLSTTNAATSSS 114
P+PT T PT T G +P+ +P P +T + T ++
Sbjct: 492 PVPTTTNTPPANPTTATPTTVGTMTPSTGTTTVPVPTTTGSPTTQTT 538
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 216 GATSSPGRHGRHGSEG 263
GA PGR GRHG G
Sbjct: 271 GAPGLPGRTGRHGKPG 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,572,129
Number of Sequences: 27780
Number of extensions: 116790
Number of successful extensions: 407
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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