Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_O14
(146 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 0.25
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 20 2.3
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 20 2.3
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 3.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 3.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 3.1
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 19 4.1
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 19 4.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 19 5.4
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 19 7.1
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 19 7.1
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 19 7.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 18 9.4
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 18 9.4
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.4 bits (48), Expect = 0.25
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 110 ETCEAAFGKRLATEPAIRAEISDIF 36
+T ++FGK LATEP + + ++ F
Sbjct: 343 KTDYSSFGKILATEPTLFSNVTPKF 367
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 20.2 bits (40), Expect = 2.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 36 PLTLVYNYADEG 1
P L+YN ADEG
Sbjct: 108 PDVLMYNSADEG 119
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 20.2 bits (40), Expect = 2.3
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -3
Query: 126 RHRDNRNL*SGIWQTPGHGAGDTSGDQRHFPL 31
R +D+ N G W+ P G T+ FP+
Sbjct: 144 RVKDSTNCNCG-WKNPSRIVGGTNTGINEFPM 174
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 36 PLTLVYNYADEG 1
P L+YN ADEG
Sbjct: 71 PDILMYNSADEG 82
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 36 PLTLVYNYADEG 1
P L+YN ADEG
Sbjct: 71 PDILMYNSADEG 82
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 36 PLTLVYNYADEG 1
P L+YN ADEG
Sbjct: 71 PDILMYNSADEG 82
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 36 PLTLVYNYADEG 1
P L+YN ADEG
Sbjct: 71 PDILMYNSADEG 82
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 36 PLTLVYNYADEG 1
P L+YN ADEG
Sbjct: 71 PDILMYNSADEG 82
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 36 PLTLVYNYADEG 1
P L+YN ADEG
Sbjct: 71 PDILMYNSADEG 82
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 36 PLTLVYNYADEG 1
P L+YN ADEG
Sbjct: 139 PDILMYNSADEG 150
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 36 PLTLVYNYADEG 1
P L+YN ADEG
Sbjct: 139 PDILMYNSADEG 150
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 84 TPGHGAGDT 58
TPG G GDT
Sbjct: 334 TPGSGDGDT 342
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -1
Query: 131 TAGTATIETCE 99
TAG +ETC+
Sbjct: 210 TAGAVVLETCQ 220
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 19.0 bits (37), Expect = 5.4
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -3
Query: 75 HGAGDTSGDQRHFP 34
HG G +G RH P
Sbjct: 202 HGLGVQNGYGRHLP 215
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 18.6 bits (36), Expect = 7.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 40 MSLISARIAGSVARRLPNAASQVSIVAV 123
MSL+ I + RRL A Q I AV
Sbjct: 212 MSLVYLEIYLATRRRLRERARQSRINAV 239
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 18.6 bits (36), Expect = 7.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 40 MSLISARIAGSVARRLPNAASQVSIVAV 123
MSL+ I + RRL A Q I AV
Sbjct: 212 MSLVYLEIYLATRRRLRERARQSRINAV 239
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 18.6 bits (36), Expect = 7.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 40 MSLISARIAGSVARRLPNAASQVSIVAV 123
MSL+ I + RRL A Q I AV
Sbjct: 212 MSLVYLEIYLATRRRLRERARQSRINAV 239
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 87 QTPGHGAGDTSGDQRHF 37
+TPG G + D+R F
Sbjct: 488 RTPGFGKDVLATDERSF 504
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 87 QTPGHGAGDTSGDQRHF 37
+TPG G + D+R F
Sbjct: 194 RTPGFGKDVLATDERSF 210
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,017
Number of Sequences: 438
Number of extensions: 765
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 29
effective length of database: 133,641
effective search space used: 2539179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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