Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_O13
         (412 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p pro...   198   2e-51
AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal pr...   198   2e-51
AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA, i...   198   2e-51
Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal prot...   189   1e-48
AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB, i...   131   4e-31
AE014135-6|AAN06542.1|  163|Drosophila melanogaster CG2168-PD, i...    54   6e-08
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB...    27   9.7  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    27   9.7  

>AY070949-1|AAL48571.1|  217|Drosophila melanogaster RE04220p
           protein.
          Length = 217

 Score =  198 bits (484), Expect = 2e-51
 Identities = 93/116 (80%), Positives = 101/116 (87%)
 Frame = +1

Query: 64  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQETKIASEGLKGRVFEVSLADLQADSDA 243
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQ  +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 244 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGY 411
           ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY
Sbjct: 81  ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGY 136


>AF034971-1|AAC62117.1|  268|Drosophila melanogaster ribosomal
           protein S3a protein.
          Length = 268

 Score =  198 bits (484), Expect = 2e-51
 Identities = 93/116 (80%), Positives = 101/116 (87%)
 Frame = +1

Query: 64  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQETKIASEGLKGRVFEVSLADLQADSDA 243
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQ  +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 244 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGY 411
           ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY
Sbjct: 81  ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGY 136


>AE014135-4|AAF59372.1|  268|Drosophila melanogaster CG2168-PA,
           isoform A protein.
          Length = 268

 Score =  198 bits (484), Expect = 2e-51
 Identities = 93/116 (80%), Positives = 101/116 (87%)
 Frame = +1

Query: 64  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQETKIASEGLKGRVFEVSLADLQADSDA 243
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQ  +IAS+ LKGRVFEVSLADLQ D D 
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80

Query: 244 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGY 411
           ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY
Sbjct: 81  ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGY 136


>Y10115-1|CAA71201.1|  270|Drosophila melanogaster ribosomal protein
           S3a protein.
          Length = 270

 Score =  189 bits (460), Expect = 1e-48
 Identities = 90/117 (76%), Positives = 98/117 (83%), Gaps = 1/117 (0%)
 Frame = +1

Query: 64  IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQETKIASEGLKGRVFEVSLA-DLQADSD 240
           +VDPF+RKDWYDVKAP+MF  RQ+G TLVNRTQ  +IAS+  KGRVFEVSL  DLQ D D
Sbjct: 21  VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80

Query: 241 AERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGY 411
            E SFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY
Sbjct: 81  PEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGY 137


>AE014135-5|AAN06541.1|  218|Drosophila melanogaster CG2168-PB,
           isoform B protein.
          Length = 218

 Score =  131 bits (316), Expect = 4e-31
 Identities = 62/73 (84%), Positives = 64/73 (87%)
 Frame = +1

Query: 193 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 372
           GRVFEVSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14  GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73

Query: 373 IEANIDVKTTDGY 411
           IEA ++ KT DGY
Sbjct: 74  IEAIVEAKTVDGY 86


>AE014135-6|AAN06542.1|  163|Drosophila melanogaster CG2168-PD,
           isoform D protein.
          Length = 163

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = +1

Query: 319 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGY 411
           MDLTTDK R MVKKWQTLIEA ++ KT DGY
Sbjct: 1   MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGY 31


>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
            isoform B protein.
          Length = 7744

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 19/96 (19%), Positives = 40/96 (41%)
 Frame = +1

Query: 115  MFTKRQVGTTLVNRTQETKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGR 294
            +  ++   T L+N T E      G        ++     D   ++ F    + A  +Q +
Sbjct: 3907 LLAQQPTATQLLNSTVELGEKCYGSTATEGREAIRSQLDDLTFDQLFDNIAITARKIQDK 3966

Query: 295  NVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTT 402
              +  + G D   D L+  + + +  + A+I++KTT
Sbjct: 3967 --IAKWSGFDEIADSLKSWLDETENALPADIELKTT 4000


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 19/96 (19%), Positives = 40/96 (41%)
 Frame = +1

Query: 115  MFTKRQVGTTLVNRTQETKIASEGLKGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGR 294
            +  ++   T L+N T E      G        ++     D   ++ F    + A  +Q +
Sbjct: 3907 LLAQQPTATQLLNSTVELGEKCYGSTATEGREAIRSQLDDLTFDQLFDNIAITARKIQDK 3966

Query: 295  NVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTT 402
              +  + G D   D L+  + + +  + A+I++KTT
Sbjct: 3967 --IAKWSGFDEIADSLKSWLDETENALPADIELKTT 4000


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,509,338
Number of Sequences: 53049
Number of extensions: 408484
Number of successful extensions: 1060
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)