Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_O13
(412 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical pr... 175 8e-45
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 31 0.33
AF016415-8|AAW88415.1| 297|Caenorhabditis elegans Serpentine re... 29 1.7
AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical ... 27 4.0
L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease pr... 27 5.3
L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease pr... 27 5.3
L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease pr... 27 5.3
AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered cut... 27 5.3
AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered cut... 27 5.3
AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered cut... 27 5.3
AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered cut... 27 5.3
AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered cut... 27 5.3
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 27 5.3
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 27 7.0
AF025452-6|AAK71871.1| 323|Caenorhabditis elegans Serpentine re... 26 9.2
>Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical
protein F56F3.5 protein.
Length = 257
Score = 175 bits (427), Expect = 8e-45
Identities = 84/115 (73%), Positives = 96/115 (83%)
Frame = +1
Query: 67 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQETKIASEGLKGRVFEVSLADLQADSDAE 246
VDPF+RK+WYD+KAP+MF RQVG TL+NRTQ TKIASEGLKGRVFEVSL DL +++E
Sbjct: 20 VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDL---NNSE 76
Query: 247 RSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGY 411
FRKF+LIAEDVQG+NVL NFH M +T DKL +VKKW TLIEAN VKTTDGY
Sbjct: 77 ADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGY 131
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 31.1 bits (67), Expect = 0.33
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -3
Query: 209 TSKTRPFRPSDAIFVSWVRLTRVVPTCLLVNMDGA 105
TSK +P R D I V+ R T CL V GA
Sbjct: 2175 TSKAQPIRSDDVISVAGTRSTETTMKCLAVQFTGA 2209
>AF016415-8|AAW88415.1| 297|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 32 protein.
Length = 297
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3
Query: 401 VVLTSMLASISVCHFFTIHLSLSVVRSMPWKLQRTLRPWTSSAISL 264
V + ++ ++ V H F+ H L V +PW T R + AISL
Sbjct: 60 VYIIFVILTMEVPHLFSNHRGLIVTLGLPWSNFATCRSAIALAISL 105
>AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical
protein Y34D9A.1 protein.
Length = 413
Score = 27.5 bits (58), Expect = 4.0
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 327 EVHAVEIAENITSLDILSDKSELAE 253
E+H +E AE++ SL +L KSE+ +
Sbjct: 63 EMHIIEPAEHMKSLKVLMQKSEIEQ 87
>L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease
protein.
Length = 570
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 287 RDVMFSAISTAWTSPLINSDGW*RNG 364
RD+ + TA PL N+ GW RNG
Sbjct: 65 RDMQHLVLRTANWKPLENNPGWSRNG 90
>L29439-1|AAA98751.1| 658|Caenorhabditis elegans endoprotease
protein.
Length = 658
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 287 RDVMFSAISTAWTSPLINSDGW*RNG 364
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>L29438-1|AAA98750.1| 684|Caenorhabditis elegans endoprotease
protein.
Length = 684
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 287 RDVMFSAISTAWTSPLINSDGW*RNG 364
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>AF039719-6|AAO12410.1| 666|Caenorhabditis elegans Blistered
cuticle protein 4, isoformf protein.
Length = 666
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 287 RDVMFSAISTAWTSPLINSDGW*RNG 364
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>AF039719-5|AAB96755.1| 699|Caenorhabditis elegans Blistered
cuticle protein 4, isoforme protein.
Length = 699
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 287 RDVMFSAISTAWTSPLINSDGW*RNG 364
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>AF039719-4|AAB96753.1| 670|Caenorhabditis elegans Blistered
cuticle protein 4, isoforma protein.
Length = 670
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 287 RDVMFSAISTAWTSPLINSDGW*RNG 364
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>AF039719-3|AAB96756.1| 730|Caenorhabditis elegans Blistered
cuticle protein 4, isoformb protein.
Length = 730
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 287 RDVMFSAISTAWTSPLINSDGW*RNG 364
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered
cuticle protein 4, isoformc protein.
Length = 827
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 287 RDVMFSAISTAWTSPLINSDGW*RNG 364
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 287 RDVMFSAISTAWTSPLINSDGW*RNG 364
RD+ + TA PL N+ GW RNG
Sbjct: 438 RDMQHLVLRTANWKPLENNPGWSRNG 463
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 26.6 bits (56), Expect = 7.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 247 FPHHYQPGDQQGRPQKHAPLDPQMQ 173
+ ++ Q QQGRPQ++A PQ Q
Sbjct: 34 YGYNNQQQQQQGRPQQYAGYPPQRQ 58
>AF025452-6|AAK71871.1| 323|Caenorhabditis elegans Serpentine
receptor, class i protein30 protein.
Length = 323
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 108 RFNIVPVFTGERINNLLLNTLLASFRKAFIFTDRP 4
R +++ T +N+L++ T FRK F+F +P
Sbjct: 275 RCSLMVATTHSTVNSLVVITTYPEFRKTFMFWKKP 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,304,043
Number of Sequences: 27780
Number of extensions: 197827
Number of successful extensions: 511
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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