Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_O12
(345 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X94613-1|CAA64319.1| 190|Drosophila melanogaster ribosomal prot... 93 1e-19
BT022718-1|AAY55134.1| 190|Drosophila melanogaster RE74350p pro... 93 1e-19
AE014134-2010|AAF53049.1| 190|Drosophila melanogaster CG6141-PB... 93 1e-19
AE014134-2009|AAF53048.2| 190|Drosophila melanogaster CG6141-PA... 93 1e-19
BT004835-1|AAO45191.1| 241|Drosophila melanogaster RH48327p pro... 28 3.7
BT022574-1|AAY54990.1| 190|Drosophila melanogaster IP06655p pro... 27 5.0
BT022549-1|AAY54965.1| 109|Drosophila melanogaster IP06555p pro... 27 5.0
AE013599-3542|AAF46955.2| 190|Drosophila melanogaster CG13538-P... 27 5.0
>X94613-1|CAA64319.1| 190|Drosophila melanogaster ribosomal protein
L9 protein.
Length = 190
Score = 92.7 bits (220), Expect = 1e-19
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +1
Query: 208 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTE 342
+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSE 105
Score = 72.9 bits (171), Expect = 1e-13
Identities = 33/59 (55%), Positives = 44/59 (74%)
Frame = +3
Query: 27 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKLEKWF 203
M+ I +NQ VKIP+ + VK+R+VT+ G RG LKR FKHLA+D+ M + R LK+EKWF
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRTFKHLALDMYMPDKRTLKVEKWF 59
>BT022718-1|AAY55134.1| 190|Drosophila melanogaster RE74350p
protein.
Length = 190
Score = 92.7 bits (220), Expect = 1e-19
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +1
Query: 208 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTE 342
+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSE 105
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 27 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKLEKWF 203
M+ I +NQ VKIP+ + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LK+EKWF
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWF 59
>AE014134-2010|AAF53049.1| 190|Drosophila melanogaster CG6141-PB,
isoform B protein.
Length = 190
Score = 92.7 bits (220), Expect = 1e-19
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +1
Query: 208 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTE 342
+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSE 105
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 27 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKLEKWF 203
M+ I +NQ VKIP+ + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LK+EKWF
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWF 59
>AE014134-2009|AAF53048.2| 190|Drosophila melanogaster CG6141-PA,
isoform A protein.
Length = 190
Score = 92.7 bits (220), Expect = 1e-19
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +1
Query: 208 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTE 342
+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSE 105
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = +3
Query: 27 MKQIVANQKVKIPESLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRQLKLEKWF 203
M+ I +NQ VKIP+ + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LK+EKWF
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWF 59
>BT004835-1|AAO45191.1| 241|Drosophila melanogaster RH48327p
protein.
Length = 241
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 75 TVHVKSRLVTVKGPRGVLKRNFKHLAVDI 161
TVH+K R +T K R K NFK L + I
Sbjct: 4 TVHLKDRTITEKLVRRAEKANFKALVLTI 32
>BT022574-1|AAY54990.1| 190|Drosophila melanogaster IP06655p
protein.
Length = 190
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 60 IPESLTVHVKSRLVTVKGPRGVLKRNFKH 146
+PESLT ++RL+ K P + K N ++
Sbjct: 27 VPESLTKKYRNRLIIPKDPYSIFKLNSRN 55
>BT022549-1|AAY54965.1| 109|Drosophila melanogaster IP06555p
protein.
Length = 109
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 60 IPESLTVHVKSRLVTVKGPRGVLKRNFKH 146
+PESLT ++RL+ K P + K N ++
Sbjct: 28 VPESLTKKYRNRLIIPKDPYSIFKLNSRN 56
>AE013599-3542|AAF46955.2| 190|Drosophila melanogaster CG13538-PA
protein.
Length = 190
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 60 IPESLTVHVKSRLVTVKGPRGVLKRNFKH 146
+PESLT ++RL+ K P + K N ++
Sbjct: 27 VPESLTKKYRNRLIIPKDPYSIFKLNSRN 55
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,446,929
Number of Sequences: 53049
Number of extensions: 288542
Number of successful extensions: 444
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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