Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_O10
(403 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 164 2e-41
03_01_0547 + 4093196-4093657,4094267-4095148 164 2e-41
03_01_0544 + 4082528-4082989,4083585-4084466 164 2e-41
03_01_0543 + 4076981-4077442,4078145-4079026 164 2e-41
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 90 7e-19
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 90 7e-19
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 59 1e-09
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 45 2e-05
02_04_0462 + 23131433-23132836 42 2e-04
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 42 2e-04
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 41 4e-04
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 36 0.016
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 33 0.11
03_05_0511 + 25056018-25059107 32 0.20
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 31 0.26
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 31 0.26
02_04_0148 - 20198407-20201424 31 0.34
04_01_0103 + 1082077-1082167,1083037-1085477 30 0.79
02_04_0017 + 18937774-18937864,18938505-18940945 30 0.79
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 29 1.4
01_06_0662 + 30987187-30987277,30987825-30990214 29 1.8
06_03_0848 - 25334701-25334949,25335076-25335184,25335667-253357... 28 2.4
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 27 5.6
10_08_0487 - 18253355-18253408,18255645-18257495 27 7.3
12_02_1071 + 25824311-25824460,25824774-25824857,25825168-258252... 26 9.7
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 26 9.7
05_03_0359 - 12929240-12929376,12931379-12933497,12933594-129337... 26 9.7
02_05_1118 + 34241819-34242217,34242350-34242522,34243499-342436... 26 9.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 164 bits (399), Expect = 2e-41
Identities = 78/90 (86%), Positives = 81/90 (90%)
Frame = +1
Query: 133 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVL 312
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IE+FEKEA EM K SFKYA VL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 313 DKLKAERERGITIDIALWKFETGKYYVTII 402
DKLKAERERGITIDIALWKFET KYY T+I
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVI 90
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 164 bits (399), Expect = 2e-41
Identities = 78/90 (86%), Positives = 81/90 (90%)
Frame = +1
Query: 133 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVL 312
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IE+FEKEA EM K SFKYA VL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 313 DKLKAERERGITIDIALWKFETGKYYVTII 402
DKLKAERERGITIDIALWKFET KYY T+I
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVI 90
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 164 bits (399), Expect = 2e-41
Identities = 78/90 (86%), Positives = 81/90 (90%)
Frame = +1
Query: 133 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVL 312
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IE+FEKEA EM K SFKYA VL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 313 DKLKAERERGITIDIALWKFETGKYYVTII 402
DKLKAERERGITIDIALWKFET KYY T+I
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVI 90
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 164 bits (399), Expect = 2e-41
Identities = 78/90 (86%), Positives = 81/90 (90%)
Frame = +1
Query: 133 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVL 312
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IE+FEKEA EM K SFKYA VL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 313 DKLKAERERGITIDIALWKFETGKYYVTII 402
DKLKAERERGITIDIALWKFET KYY T+I
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVI 90
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 89.8 bits (213), Expect = 7e-19
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +1
Query: 154 INIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKLKAER 333
+N+ ++GHVDSGKST +G L++ G I ++ + K EKEA E GKGSF YA +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 334 ERGITIDIALWKFETGKYYVTII 402
ERG+T+ +A+ ET KY V ++
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVLL 330
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 89.8 bits (213), Expect = 7e-19
Identities = 40/83 (48%), Positives = 58/83 (69%)
Frame = +1
Query: 154 INIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKLKAER 333
+N+ ++GHVDSGKST +G L++ G I ++ + K EKEA E GKGSF YA +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 334 ERGITIDIALWKFETGKYYVTII 402
ERG+T+ +A+ ET KY V ++
Sbjct: 308 ERGVTMTVAVAYLETKKYRVVLL 330
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 58.8 bits (136), Expect = 1e-09
Identities = 27/74 (36%), Positives = 46/74 (62%)
Frame = +1
Query: 181 DSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKLKAERERGITIDIA 360
D+GKST G +++ G +D+R I+K+EKEA + + S+ A ++D + ER +G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 361 LWKFETGKYYVTII 402
FET TI+
Sbjct: 64 RAHFETETTRFTIL 77
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +1
Query: 277 MGKGSFKYAGVLDKLKAERERGITIDIALWKFETGKYYVTII 402
+GKGSF YA +D+ ERERGIT+ + + F+T Y+V ++
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLL 317
>02_04_0462 + 23131433-23132836
Length = 467
Score = 41.9 bits (94), Expect = 2e-04
Identities = 28/83 (33%), Positives = 40/83 (48%)
Frame = +1
Query: 130 KMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGV 309
K + K H+NI IGHVD GK+T T L + A +K+++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE--------------- 107
Query: 310 LDKLKAERERGITIDIALWKFET 378
+D ER RGITI+ A ++ET
Sbjct: 108 IDAAPEERARGITINTATVEYET 130
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 41.5 bits (93), Expect = 2e-04
Identities = 29/82 (35%), Positives = 39/82 (47%)
Frame = +1
Query: 157 NIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKLKAERE 336
NI + H+DSGK+T T ++Y G I E HE+ +G +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI---------HEIHEV-RGRDGVGAKMDSMDLERE 119
Query: 337 RGITIDIALWKFETGKYYVTII 402
+GITI A Y V II
Sbjct: 120 KGITIQSAATYCTWNGYQVNII 141
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 40.7 bits (91), Expect = 4e-04
Identities = 31/82 (37%), Positives = 39/82 (47%)
Frame = +1
Query: 139 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDK 318
+ K H+N+ IGHVD GK+T T AI K EA GK +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTA------------AITKVLAEA---GKAKAVAFDEIDK 107
Query: 319 LKAERERGITIDIALWKFETGK 384
E+ RGITI A ++ET K
Sbjct: 108 APEEKARGITIATAHVEYETAK 129
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 35.5 bits (78), Expect = 0.016
Identities = 26/65 (40%), Positives = 32/65 (49%)
Frame = +1
Query: 157 NIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKLKAERE 336
N +I HVD GKST L+ G I + G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 337 RGITI 351
RGIT+
Sbjct: 103 RGITV 107
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 32.7 bits (71), Expect = 0.11
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 157 NIVVIGHVDSGKSTTTGHLIYKCGG--IDERAIEKFEKE 267
N+ VI HVD GK+T L+ +CG ERA++ E
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLE 104
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.20
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 157 NIVVIGHVDSGKSTTTGHLIYKCG 228
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 31.5 bits (68), Expect = 0.26
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +1
Query: 151 HINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKLKAE 330
HI+ V++ H+D+GK+TTT ++Y G + E +G+ +D ++ E
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGR---------NYKIGEFQEGTV----TMDWMEQE 150
Query: 331 RERGITI 351
+ERGITI
Sbjct: 151 QERGITI 157
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 31.5 bits (68), Expect = 0.26
Identities = 25/67 (37%), Positives = 32/67 (47%)
Frame = +1
Query: 157 NIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKLKAERE 336
N +I H+D GKST L+ G + +R EM K F LD + ERE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERE 122
Query: 337 RGITIDI 357
RGITI +
Sbjct: 123 RGITIKL 129
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.1 bits (67), Expect = 0.34
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +1
Query: 157 NIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKLKAERE 336
N ++ HVD GK++ HLI G E+ E GS A V+D L+ E+
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 337 RGITIDIA 360
R IT+ A
Sbjct: 66 RAITMKSA 73
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 29.9 bits (64), Expect = 0.79
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 133 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERA---IEKFEKEAHEMGKG-SFKY 300
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 301 AGV 309
G+
Sbjct: 73 TGI 75
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 29.9 bits (64), Expect = 0.79
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 133 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERA---IEKFEKEAHEMGKG-SFKY 300
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 301 AGV 309
G+
Sbjct: 73 TGI 75
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 157 NIVVIGHVDSGKSTTTGHLIYKCG 228
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 157 NIVVIGHVDSGKSTTTGHLIYKCG 228
N+ V+ HVD GKST T L+ G
Sbjct: 21 NMSVVAHVDHGKSTLTDSLVAAAG 44
>06_03_0848 -
25334701-25334949,25335076-25335184,25335667-25335701,
25335793-25335843,25335941-25336018,25336214-25336351,
25336664-25336729,25337387-25337572
Length = 303
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 271 HEMGKGSFKYAGVLDKLKAERERGITIDIALWKFETG 381
H +G G+F + L + + G+ + +WKF TG
Sbjct: 116 HRVGVGAFVMNDKREVLAVQEKSGVLRGLGVWKFPTG 152
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 145 KVHINIVVIGHVDSG 189
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>10_08_0487 - 18253355-18253408,18255645-18257495
Length = 634
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 374 SNFQRAISMVIPRSRSAFSLSNTPAYLKEPLPI 276
+N ++ I + + S+ L NTP YL++ L I
Sbjct: 597 TNTEQVIKLQVSNSKEIQELQNTPLYLQKDLSI 629
>12_02_1071 +
25824311-25824460,25824774-25824857,25825168-25825246,
25825334-25825428,25825940-25826067,25826160-25826393,
25826509-25826683,25826716-25826748,25827292-25827375,
25827929-25828169,25828275-25828453,25828800-25828873,
25830800-25830950,25831178-25831252,25831748-25831778,
25832107-25832339
Length = 681
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 262 KEAHEMGKGSFKYAGVLDKLKAERERGITIDIALWKFE 375
K ++G +F + G AER R +T DIAL F+
Sbjct: 307 KSTRDLGCQTFYFGGGPYLKSAERWRSLTKDIALQNFD 344
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 337 AHARPLVCPIPQRT*RNPYPFHGLPSR 257
A ARP + P+P+R + +PF P R
Sbjct: 351 ARARPSIPPLPRRACPSSWPFPTSPKR 377
>05_03_0359 -
12929240-12929376,12931379-12933497,12933594-12933773,
12933905-12934118,12934199-12934551,12934642-12934864,
12934953-12935230,12935456-12935725,12935817-12935939,
12936025-12936102,12936351-12936527,12936597-12936686,
12937010-12937120,12937397-12937585,12937667-12937858,
12937990-12938076,12938153-12938257,12938340-12938396,
12938471-12938545,12938647-12938763,12938876-12939000,
12939082-12939121,12939241-12939291,12939382-12939569,
12939808-12939901,12939976-12940149,12940242-12940337,
12940597-12940689,12940794-12940955,12941034-12941240,
12941356-12941728,12942379-12942436,12943096-12943171,
12943874-12943941,12944321-12944642
Length = 2433
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 303 SVLEGTLTHFMGFLLELFDGTFVDTTAFV 217
S+L GT++H GF+ L+ T + A +
Sbjct: 125 SLLSGTISHIWGFIFSLYGTTHLRNRAIL 153
>02_05_1118 +
34241819-34242217,34242350-34242522,34243499-34243660,
34243762-34243903,34244320-34244544,34244649-34244711,
34244817-34244891,34245198-34245404,34247274-34247465,
34247515-34247634
Length = 585
Score = 26.2 bits (55), Expect = 9.7
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +1
Query: 178 VDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKLKAERERGITIDI 357
V S S T L+ + G D +++ ++A ++ + + V D + RE+G T+D+
Sbjct: 428 VFSKSSRETAKLVARWFGPDSDELKRMSEKALKLAQPEAVFDIVRDIHELSREQGPTVDV 487
Query: 358 AL 363
+
Sbjct: 488 TI 489
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,120,723
Number of Sequences: 37544
Number of extensions: 209934
Number of successful extensions: 576
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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