Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_O10
(403 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 180 3e-46
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 180 3e-46
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 180 3e-46
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 180 3e-46
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 129 6e-31
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 92 1e-19
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 92 1e-19
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 85 2e-17
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 7e-04
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 36 0.008
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 36 0.008
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 36 0.008
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 36 0.014
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 34 0.044
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 34 0.044
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 31 0.23
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 31 0.23
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 30 0.54
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 30 0.54
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 30 0.71
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 30 0.71
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.7
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 27 3.8
AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical ... 27 3.8
Z81497-8|CAC70080.1| 707|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z75953-7|CAB00101.2| 707|Caenorhabditis elegans Hypothetical pr... 27 5.0
U00181-1|AAA18259.1| 707|Caenorhabditis elegans protein kinase ... 27 5.0
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 6.7
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 6.7
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 6.7
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 6.7
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 26 8.8
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 26 8.8
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 26 8.8
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 180 bits (439), Expect = 3e-46
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +1
Query: 133 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVL 312
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID+R IEKFEKEA EMGKGSFKYA VL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 313 DKLKAERERGITIDIALWKFETGKYYVTII 402
DKLKAERERGITIDIALWKFET KYY+TII
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITII 90
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 180 bits (439), Expect = 3e-46
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +1
Query: 133 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVL 312
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID+R IEKFEKEA EMGKGSFKYA VL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 313 DKLKAERERGITIDIALWKFETGKYYVTII 402
DKLKAERERGITIDIALWKFET KYY+TII
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITII 90
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 180 bits (439), Expect = 3e-46
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +1
Query: 133 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVL 312
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID+R IEKFEKEA EMGKGSFKYA VL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 313 DKLKAERERGITIDIALWKFETGKYYVTII 402
DKLKAERERGITIDIALWKFET KYY+TII
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITII 90
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 180 bits (439), Expect = 3e-46
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +1
Query: 133 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVL 312
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID+R IEKFEKEA EMGKGSFKYA VL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 313 DKLKAERERGITIDIALWKFETGKYYVTII 402
DKLKAERERGITIDIALWKFET KYY+TII
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITII 90
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 129 bits (312), Expect = 6e-31
Identities = 60/67 (89%), Positives = 62/67 (92%)
Frame = +1
Query: 133 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVL 312
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGID+R IEKFEKEA EMGKGSFKYA VL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 313 DKLKAER 333
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 92.3 bits (219), Expect = 1e-19
Identities = 42/87 (48%), Positives = 59/87 (67%)
Frame = +1
Query: 142 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKL 321
+K IN++V+GHVD+GKST GHL++ +D R I+KF+ EA GK SF YA VLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 322 KAERERGITIDIALWKFETGKYYVTII 402
+ ERERG+T+DI FET + ++
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLL 253
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 92.3 bits (219), Expect = 1e-19
Identities = 42/87 (48%), Positives = 59/87 (67%)
Frame = +1
Query: 142 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKL 321
+K IN++V+GHVD+GKST GHL++ +D R I+KF+ EA GK SF YA VLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 322 KAERERGITIDIALWKFETGKYYVTII 402
+ ERERG+T+DI FET + ++
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLL 271
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 85.0 bits (201), Expect = 2e-17
Identities = 39/89 (43%), Positives = 59/89 (66%)
Frame = +1
Query: 136 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLD 315
G K HIN+V +GHVD+GKST G L++ G +D+R +EK+E+EA E G+ S+ + +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 316 KLKAERERGITIDIALWKFETGKYYVTII 402
ERE+G T+++ FET K + TI+
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTIL 192
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 41.5 bits (93), Expect = 2e-04
Identities = 25/68 (36%), Positives = 35/68 (51%)
Frame = +1
Query: 157 NIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKLKAERE 336
NI + H+DSGK+T T ++Y G ID HE+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID---------SMHEV-RGKDDVGATMDFMDLERQ 95
Query: 337 RGITIDIA 360
RGITI A
Sbjct: 96 RGITIQSA 103
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 7e-04
Identities = 30/82 (36%), Positives = 40/82 (48%)
Frame = +1
Query: 157 NIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKLKAERE 336
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 337 RGITIDIALWKFETGKYYVTII 402
RGIT+ A + + + +I
Sbjct: 74 RGITVQSAAVNLDWKGHRINLI 95
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 36.3 bits (80), Expect = 0.008
Identities = 29/82 (35%), Positives = 39/82 (47%)
Frame = +1
Query: 139 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDK 318
++K H+N+ IGHVD GK+T T AI K A G KY + D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTS------------AITKI--LATSKGAKYRKYEDI-DN 89
Query: 319 LKAERERGITIDIALWKFETGK 384
E+ RGITI+ ++ET K
Sbjct: 90 APEEKARGITINAFHLEYETAK 111
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 36.3 bits (80), Expect = 0.008
Identities = 29/82 (35%), Positives = 39/82 (47%)
Frame = +1
Query: 139 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDK 318
++K H+N+ IGHVD GK+T T AI K A G KY + D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTS------------AITKI--LATSKGAKYRKYEDI-DN 90
Query: 319 LKAERERGITIDIALWKFETGK 384
E+ RGITI+ ++ET K
Sbjct: 91 APEEKARGITINAFHLEYETAK 112
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 36.3 bits (80), Expect = 0.008
Identities = 29/82 (35%), Positives = 39/82 (47%)
Frame = +1
Query: 139 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDK 318
++K H+N+ IGHVD GK+T T AI K A G KY + D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTS------------AITKI--LATSKGAKYRKYEDI-DN 90
Query: 319 LKAERERGITIDIALWKFETGK 384
E+ RGITI+ ++ET K
Sbjct: 91 APEEKARGITINAFHLEYETAK 112
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 35.5 bits (78), Expect = 0.014
Identities = 24/65 (36%), Positives = 33/65 (50%)
Frame = +1
Query: 157 NIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKLKAERE 336
N ++ HVD GKST L+ CG A+ +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCG-----AVPPGQKQ-------------MLDKLQVERE 85
Query: 337 RGITI 351
RGIT+
Sbjct: 86 RGITV 90
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 33.9 bits (74), Expect = 0.044
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +1
Query: 145 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYA--GVLDK 318
K+++N+ IGH+D GK+T T AI + + + KG K+ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTS------------AITRVQAK-----KGFAKHIKFDEIDK 85
Query: 319 LKAERERGITIDIALWKFET 378
K E++RGITI++A +E+
Sbjct: 86 GKEEKKRGITINVAHIGYES 105
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 33.9 bits (74), Expect = 0.044
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +1
Query: 145 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYA--GVLDK 318
K+++N+ IGH+D GK+T T AI + + + KG K+ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTS------------AITRVQAK-----KGFAKHIKFDEIDK 85
Query: 319 LKAERERGITIDIALWKFET 378
K E++RGITI++A +E+
Sbjct: 86 GKEEKKRGITINVAHIGYES 105
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 31.5 bits (68), Expect = 0.23
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 157 NIVVIGHVDSGKSTTTGHLIYKCG 228
N+ VI HVD GKST T L+ K G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAG 44
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 31.5 bits (68), Expect = 0.23
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 157 NIVVIGHVDSGKSTTTGHLIYKCG 228
N+ VI HVD GKST T L+ K G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAG 44
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 30.3 bits (65), Expect = 0.54
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 127 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDE---RAIEKFEKEAHEMGKGSFK 297
P K+ + + V+G+VD+GKST G L + +D+ A K + HE G
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH--SALDDGRGAARTKLFRHKHEFESGRTS 189
Query: 298 YAG 306
G
Sbjct: 190 SVG 192
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 30.3 bits (65), Expect = 0.54
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 127 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDE---RAIEKFEKEAHEMGKGSFK 297
P K+ + + V+G+VD+GKST G L + +D+ A K + HE G
Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH--SALDDGRGAARTKLFRHKHEFESGRTS 189
Query: 298 YAG 306
G
Sbjct: 190 SVG 192
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.9 bits (64), Expect = 0.71
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 235 DERAIEKFEKEAHEMGKGSFKYAGVLDKLKAERE 336
++R ++ EKE ++ F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.9 bits (64), Expect = 0.71
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 235 DERAIEKFEKEAHEMGKGSFKYAGVLDKLKAERE 336
++R ++ EKE ++ F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 154 INIVVIGHVDSGKSTTT 204
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 154 INIVVIGHVDSGKSTTT 204
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 28.3 bits (60), Expect = 2.2
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +1
Query: 157 NIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVLDKLKAERE 336
+I+ GH+D S GH +K GI E FE E + + + +G ERE
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATSTSYERE 1691
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 402 DDGDIVFAGFELPESNIDGDTTLTLGL 322
+DGDIV + F+ P I D T++L L
Sbjct: 263 EDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical
protein Y37H2A.6 protein.
Length = 410
Score = 27.5 bits (58), Expect = 3.8
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 130 KMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIE--KFEKEAHEMGK 285
K+GK K+ + ++ D GKS +L + C + + +E +F+ +++GK
Sbjct: 16 KLGKNKIFLRACILYEYDQGKSVYESYLSF-CDAVGDDFMEYREFDFWYYKLGK 68
>Z81497-8|CAC70080.1| 707|Caenorhabditis elegans Hypothetical
protein F57F5.5 protein.
Length = 707
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 211 LIYKCGGIDERAIEKFEKEAHEMGKGSF 294
+++KC G A+E+ KE E G G F
Sbjct: 216 VVWKCPGNKADAVEELGKEIQETGAGRF 243
>Z75953-7|CAB00101.2| 707|Caenorhabditis elegans Hypothetical
protein F57F5.5 protein.
Length = 707
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 211 LIYKCGGIDERAIEKFEKEAHEMGKGSF 294
+++KC G A+E+ KE E G G F
Sbjct: 216 VVWKCPGNKADAVEELGKEIQETGAGRF 243
>U00181-1|AAA18259.1| 707|Caenorhabditis elegans protein kinase C
protein.
Length = 707
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 211 LIYKCGGIDERAIEKFEKEAHEMGKGSF 294
+++KC G A+E+ KE E G G F
Sbjct: 216 VVWKCPGNKADAVEELGKEIQETGAGRF 243
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 26.6 bits (56), Expect = 6.7
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDERAIEKFEKEAHEMGK 285
PK +EK+ I + +V+ G TTG +CGG ++ RA+ + A E K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 26.6 bits (56), Expect = 6.7
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDERAIEKFEKEAHEMGK 285
PK +EK+ I + +V+ G TTG +CGG ++ RA+ + A E K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 116 LLDSLFHFTKLFLQTLTTD 60
L SL HF+K+ +QT+TTD
Sbjct: 1683 LAASLTHFSKMNIQTMTTD 1701
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 116 LLDSLFHFTKLFLQTLTTD 60
L SL HF+K+ +QT+TTD
Sbjct: 1683 LAASLTHFSKMNIQTMTTD 1701
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 26.6 bits (56), Expect = 6.7
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 127 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDERAIEKFEKEAHEMGK 285
PK +EK+ I + +V+ G TTG +CGG ++ RA+ + A E K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -3
Query: 341 PRSRSAFSLSNTPAYLKEPLPISWASFSNFSMARSSIPP 225
P ++ P Y++ P P+ ++ +N S+ARS+ P
Sbjct: 296 PTKGFSYDHHTVPRYVEPPKPVVYSLSANKSLARSASVP 334
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -3
Query: 341 PRSRSAFSLSNTPAYLKEPLPISWASFSNFSMARSSIPP 225
P ++ P Y++ P P+ ++ +N S+ARS+ P
Sbjct: 415 PTKGFSYDHHTVPRYVEPPKPVVYSLSANKSLARSASVP 453
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 26.2 bits (55), Expect = 8.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 185 PASPQQLVT*STNAVVSTNVPSKSS 259
P+SPQQL NA STNV + S
Sbjct: 120 PSSPQQLHLAFANATTSTNVTNAKS 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,236,367
Number of Sequences: 27780
Number of extensions: 173840
Number of successful extensions: 607
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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