Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_O10
(403 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 180 4e-48
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 180 4e-48
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 67 6e-14
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 39 2e-05
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.43
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.56
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 22 3.0
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 22 3.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 4.0
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 4.0
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 4.0
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 4.0
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 5.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 9.2
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 20 9.2
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 20 9.2
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 20 9.2
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 20 9.2
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 180 bits (439), Expect = 4e-48
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +1
Query: 133 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVL 312
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGID+R IEKFEKEA EMGKGSFKYA VL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 313 DKLKAERERGITIDIALWKFETGKYYVTII 402
DKLKAERERGITIDIALWKFET KYYVTII
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTII 90
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 180 bits (439), Expect = 4e-48
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +1
Query: 133 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERAIEKFEKEAHEMGKGSFKYAGVL 312
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGID+R IEKFEKEA EMGKGSFKYA VL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 313 DKLKAERERGITIDIALWKFETGKYYVTII 402
DKLKAERERGITIDIALWKFET KYYVTII
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTII 90
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 67.3 bits (157), Expect = 6e-14
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +1
Query: 307 VLDKLKAERERGITIDIALWKFETGKYYVTII 402
VLDKLKAERERGITIDIALWKFET KYYVTII
Sbjct: 2 VLDKLKAERERGITIDIALWKFETSKYYVTII 33
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 38.7 bits (86), Expect = 2e-05
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 352 DIALWKFETGKYYVTII 402
DIALWKFET KYYVTII
Sbjct: 1 DIALWKFETSKYYVTII 17
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 24.6 bits (51), Expect = 0.43
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 145 KVHINIVVIGHVDSGKST 198
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.56
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 154 INIVVIGHVDSGKST 198
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.8 bits (44), Expect = 3.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 335 SRSAFSLSNTPAYLKEPLPISWASFSN 255
+RS F L N P +K+ L ++ F+N
Sbjct: 78 TRSPFLLLNDPELIKDILIRDFSKFAN 104
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.8 bits (44), Expect = 3.0
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = -1
Query: 250 RWHVRRYHRIC 218
RW + ++HR+C
Sbjct: 186 RWDLGKFHRVC 196
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -1
Query: 262 SRTFRWHVRRYHRICRSSDQLL 197
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -1
Query: 262 SRTFRWHVRRYHRICRSSDQLL 197
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -1
Query: 262 SRTFRWHVRRYHRICRSSDQLL 197
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -1
Query: 262 SRTFRWHVRRYHRICRSSDQLL 197
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.0 bits (42), Expect = 5.3
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 298 YAGVLDKLKAERERGITIDIALWKFETGKYYVTII 402
Y GV D L E DI L+ G Y VTI+
Sbjct: 89 YGGV-DTLHVPSEHIWLPDIVLYNNADGNYEVTIM 122
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.2 bits (40), Expect = 9.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 218 TNAVVSTNVPSKSSRRKPMKWVRVPSSTLGYWTN 319
TNA + S+S R+ ++ RVPS G T+
Sbjct: 1767 TNASAHSRSGSQSMPRQNGRYSRVPSQGGGSGTH 1800
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 20.2 bits (40), Expect = 9.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3
Query: 3 GSPGAAGIRT 32
GSPG+ GIR+
Sbjct: 286 GSPGSGGIRS 295
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 20.2 bits (40), Expect = 9.2
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2
Query: 309 YPSVLEGTLTHFMG 268
YPS+ +GT ++ +G
Sbjct: 25 YPSIRQGTTSYCLG 38
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 20.2 bits (40), Expect = 9.2
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 285 GFLQVRWGIGQT 320
GFL+ RW I T
Sbjct: 161 GFLRTRWSISGT 172
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 20.2 bits (40), Expect = 9.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 399 DGDIVFAGFELPESNIDGDTT 337
DG I A F + + I GD T
Sbjct: 121 DGHIKIADFGMCKEGISGDKT 141
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,403
Number of Sequences: 438
Number of extensions: 2417
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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