Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_O03
(250 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 85 4e-17
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 85 4e-17
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 85 4e-17
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 85 4e-17
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 85 4e-17
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 71 7e-13
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 46 2e-05
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 46 2e-05
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 46 2e-05
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 35 0.042
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 33 0.13
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 33 0.13
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 33 0.13
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 33 0.13
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 33 0.13
AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 33 0.13
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 33 0.17
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 33 0.17
AB032953-1|BAA86441.2| 2144|Homo sapiens KIAA1127 protein protein. 29 3.6
BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 27 8.3
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 85.0 bits (201), Expect = 4e-17
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAET* 199
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V +
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 200 LCHGVFMELERRVDASE 250
++ EL ++V +E
Sbjct: 152 FAKNMY-ELHKKVSPNE 167
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 85.0 bits (201), Expect = 4e-17
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAET* 199
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V +
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 200 LCHGVFMELERRVDASE 250
++ EL ++V +E
Sbjct: 152 FAKNMY-ELHKKVSPNE 167
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 85.0 bits (201), Expect = 4e-17
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAET* 199
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V +
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 200 LCHGVFMELERRVDASE 250
++ EL ++V +E
Sbjct: 152 FAKNMY-ELHKKVSPNE 167
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 85.0 bits (201), Expect = 4e-17
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAET* 199
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V +
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 200 LCHGVFMELERRVDASE 250
++ EL ++V +E
Sbjct: 152 FAKNMY-ELHKKVSPNE 167
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 85.0 bits (201), Expect = 4e-17
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAET* 199
V++HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V +
Sbjct: 85 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 144
Query: 200 LCHGVFMELERRVDASE 250
++ EL ++V +E
Sbjct: 145 FAKNMY-ELHKKVSPNE 160
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 70.9 bits (166), Expect = 7e-13
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAET* 199
V++HPV+L VD+YERRN + RVIGTLLGT +K VEVTNCF V + E +D+V +
Sbjct: 82 VRLHPVLLASTVDSYERRNKGAARVIGTLLGTVNKHSVEVTNCFSVSYNE-SDEVVVDME 140
Query: 200 LCHGVFMELERRVDASE 250
++ EL ++V +E
Sbjct: 141 FAKNMY-ELHKKVSPNE 156
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKE 169
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E
Sbjct: 9 VVVHPLVLLSVVDHFNRIVKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDE 60
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKE 169
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDE 60
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKE 169
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDE 60
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 35.1 bits (77), Expect = 0.042
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHAD 178
V++ +V+ +I+ Y+ + V G LLG K +E+TNCF P D
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVKDRLEITNCFPFPQHTEDD 91
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHAD 178
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDD 91
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHAD 178
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDD 91
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHAD 178
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDD 91
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHAD 178
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDD 91
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHAD 178
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDD 91
>AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHAD 178
V++ +V+ +I+ Y+ + V G LLG + +E+TNCF P D
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDD 91
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 11 NLSVKVHPVVLFQIVDAYERRNADSHR---VIGTLLGTSDKGVVEVTNCF 151
++SV +HP+V+ I D + R + R VIG L+G + +EV N F
Sbjct: 8 SVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSF 57
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 11 NLSVKVHPVVLFQIVDAYERRNADSHR---VIGTLLGTSDKGVVEVTNCF 151
++SV +HP+V+ I D + R + R VIG L+G + +EV N F
Sbjct: 38 SVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSF 87
>AB032953-1|BAA86441.2| 2144|Homo sapiens KIAA1127 protein protein.
Length = 2144
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 41 LFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNC 148
L VDA R D + +I TLLG++D V +C
Sbjct: 738 LMYFVDATMIRKVDQNGIISTLLGSNDLTAVRPLSC 773
>BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein.
Length = 349
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 20 VKVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHAD 178
V++ +V+F+ Y+ + V G LLG + +E+TNCF P D
Sbjct: 39 VQIDGLVVFK---HYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDD 88
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,077,853
Number of Sequences: 237096
Number of extensions: 526876
Number of successful extensions: 1092
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 76,859,062
effective HSP length: 60
effective length of database: 62,633,302
effective search space used: 1377932644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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