Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_O01
         (411 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    81   1e-17
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   3.3  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    22   7.6  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 81.4 bits (192), Expect = 1e-17
 Identities = 34/45 (75%), Positives = 41/45 (91%)
 Frame = +2

Query: 182 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLK 316
           LFEKR KN+ IGQ++QP RDLSRFV+WPKYIRIQR +A+LQ+RLK
Sbjct: 37  LFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLK 81



 Score = 45.2 bits (102), Expect = 9e-07
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = +3

Query: 318 VPAPINQFTQTLDNTTAKGLFKILEKYRPE 407
           +P PINQFTQTLD  TA+ + K  +KYRPE
Sbjct: 82  IPPPINQFTQTLDKPTAQQVMKCWKKYRPE 111


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 112 DREKSSGRSTCGEES*AQEDCKPS 183
           DR ++ GRS C   S +  D +PS
Sbjct: 884 DRSEAGGRSLCTNGSSSGRDSQPS 907


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 289 KGCVTASSQMCLRQSTSSPRH 351
           +G V  S ++C R+S + PR+
Sbjct: 599 RGLVQRSGKLCARRSGTYPRY 619


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,329
Number of Sequences: 2352
Number of extensions: 7491
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)