Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N22
         (352 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    67   2e-13
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    67   2e-13
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    67   2e-13
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    67   2e-13
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    26   0.47 
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    22   7.6  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 67.3 bits (157), Expect = 2e-13
 Identities = 32/86 (37%), Positives = 46/86 (53%)
 Frame = +1

Query: 94  HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCK 273
           HYT G E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y  +  
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 274 LECAIYPVPQVYTAVVEPYNSILTTH 351
              ++ P P+V   VVEPYN+ L+ H
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIH 86


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 67.3 bits (157), Expect = 2e-13
 Identities = 32/86 (37%), Positives = 46/86 (53%)
 Frame = +1

Query: 94  HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCK 273
           HYT G E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y  +  
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 274 LECAIYPVPQVYTAVVEPYNSILTTH 351
              ++ P P+V   VVEPYN+ L+ H
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIH 86


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 67.3 bits (157), Expect = 2e-13
 Identities = 32/86 (37%), Positives = 46/86 (53%)
 Frame = +1

Query: 94  HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCK 273
           HYT G E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y  +  
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 274 LECAIYPVPQVYTAVVEPYNSILTTH 351
              ++ P P+V   VVEPYN+ L+ H
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIH 86


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 67.3 bits (157), Expect = 2e-13
 Identities = 32/86 (37%), Positives = 46/86 (53%)
 Frame = +1

Query: 94  HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKCK 273
           HYT G E+VD VLD +RK  + C  LQGF + H            LL+ ++  +Y  +  
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 274 LECAIYPVPQVYTAVVEPYNSILTTH 351
              ++ P P+V   VVEPYN+ L+ H
Sbjct: 61  NTYSVVPSPKVSDTVVEPYNATLSIH 86


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.8 bits (54), Expect = 0.47
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 345  CKDRVVGLYNSSVHLGYGIDSALQF 271
            CKD +   Y  S+  G+ ID+ LQ+
Sbjct: 1820 CKDAIDAQYERSLSSGFFIDNCLQY 1844


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 303 GVHCCCR 323
           G HCCCR
Sbjct: 285 GQHCCCR 291


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,412
Number of Sequences: 2352
Number of extensions: 7849
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25364985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)