Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_N22
(352 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 196 4e-51
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 196 4e-51
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 196 4e-51
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 196 4e-51
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 189 4e-49
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 189 4e-49
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 189 4e-49
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 189 4e-49
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 186 5e-48
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 186 5e-48
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 184 2e-47
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 178 8e-46
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 177 2e-45
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 173 4e-44
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 169 4e-43
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 169 4e-43
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 99 8e-22
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 98 1e-21
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 98 2e-21
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 97 4e-21
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 93 4e-20
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 93 4e-20
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 89 6e-19
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 89 6e-19
Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical pr... 29 0.71
Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical pr... 27 5.0
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 27 5.0
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 27 5.0
Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical pr... 26 6.6
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 26 8.7
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 26 8.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 196 bits (478), Expect = 4e-51
Identities = 91/114 (79%), Positives = 95/114 (83%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+F
Sbjct: 79 RTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVF 138
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LLMERLSVDYGKK KLE +IYP PQV TAVVEPYNSILTTH
Sbjct: 139 HSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTH 192
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 196 bits (478), Expect = 4e-51
Identities = 91/114 (79%), Positives = 95/114 (83%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+F
Sbjct: 78 RTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVF 137
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LLMERLSVDYGKK KLE +IYP PQV TAVVEPYNSILTTH
Sbjct: 138 HSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTH 191
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 196 bits (478), Expect = 4e-51
Identities = 91/114 (79%), Positives = 95/114 (83%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+F
Sbjct: 79 RTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVF 138
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LLMERLSVDYGKK KLE +IYP PQV TAVVEPYNSILTTH
Sbjct: 139 HSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTH 192
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 196 bits (478), Expect = 4e-51
Identities = 91/114 (79%), Positives = 95/114 (83%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+F
Sbjct: 79 RTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVF 138
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LLMERLSVDYGKK KLE +IYP PQV TAVVEPYNSILTTH
Sbjct: 139 HSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTH 192
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 189 bits (461), Expect = 4e-49
Identities = 85/114 (74%), Positives = 95/114 (83%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +F
Sbjct: 77 RTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVF 136
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LLMERLSVDYGKK KLE +IYP PQV TAVVEPYNSILTTH
Sbjct: 137 HSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTH 190
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 189 bits (461), Expect = 4e-49
Identities = 85/114 (74%), Positives = 95/114 (83%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +F
Sbjct: 77 RTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVF 136
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LLMERLSVDYGKK KLE +IYP PQV TAVVEPYNSILTTH
Sbjct: 137 HSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTH 190
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 189 bits (461), Expect = 4e-49
Identities = 85/114 (74%), Positives = 95/114 (83%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +F
Sbjct: 77 RTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVF 136
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LLMERLSVDYGKK KLE +IYP PQV TAVVEPYNSILTTH
Sbjct: 137 HSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSILTTH 190
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 189 bits (461), Expect = 4e-49
Identities = 85/114 (74%), Positives = 95/114 (83%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +F
Sbjct: 77 RTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVF 136
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LLMERLSVDYGKK KLE +IYP PQV TAVVEPYNSILTTH
Sbjct: 137 HSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTH 190
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 186 bits (452), Expect = 5e-48
Identities = 83/114 (72%), Positives = 93/114 (81%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRIR+LAD C+GLQGF +F
Sbjct: 77 RTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVF 136
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LLMERLSVDYGKK KLE +IYP PQV TAVVEPYNSILTTH
Sbjct: 137 HSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTH 190
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 186 bits (452), Expect = 5e-48
Identities = 83/114 (72%), Positives = 93/114 (81%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LDRIR+LAD C+GLQGF +F
Sbjct: 77 RTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVF 136
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LLMERLSVDYGKK KLE +IYP PQV TAVVEPYNSILTTH
Sbjct: 137 HSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTH 190
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 184 bits (448), Expect = 2e-47
Identities = 82/114 (71%), Positives = 93/114 (81%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+DR+R+L + C GLQGFL+F
Sbjct: 84 RTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQGFLVF 143
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LLMERLSVDYGKK KLE IYP PQV T++VEPYNSILTTH
Sbjct: 144 HSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSILTTH 197
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 178 bits (434), Expect = 8e-46
Identities = 77/114 (67%), Positives = 94/114 (82%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+DR+R+L ++C LQGFLIF
Sbjct: 79 RTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQGFLIF 138
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H L+MERLS+DYGKK KLE +IYP PQ+ T++VEPYNS+LTTH
Sbjct: 139 HSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNSLLTTH 192
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 177 bits (431), Expect = 2e-45
Identities = 77/114 (67%), Positives = 91/114 (79%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LDRIR+LA+ C GLQGF +F
Sbjct: 76 RTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNCEGLQGFFVF 135
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H +LMERLS +YGKK KLE +IYP PQ+ T+VVEPYNSILTTH
Sbjct: 136 HSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSILTTH 189
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 173 bits (420), Expect = 4e-44
Identities = 77/114 (67%), Positives = 89/114 (78%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDRIRK + C GLQGFL+F
Sbjct: 82 RNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLVF 141
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LLMERLSV++GKK KLE ++YP PQV T+VVEPYNSILTTH
Sbjct: 142 HSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTH 195
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 169 bits (412), Expect = 4e-43
Identities = 76/114 (66%), Positives = 91/114 (79%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IF
Sbjct: 85 RTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIF 144
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LLMERLS +YGKK KLE AIYP PQV T++VEPYNSIL TH
Sbjct: 145 HSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTH 198
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 169 bits (412), Expect = 4e-43
Identities = 76/114 (66%), Positives = 91/114 (79%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
RTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IF
Sbjct: 57 RTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIF 116
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LLMERLS +YGKK KLE AIYP PQV T++VEPYNSIL TH
Sbjct: 117 HSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTH 170
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 99.1 bits (236), Expect = 8e-22
Identities = 45/114 (39%), Positives = 66/114 (57%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
R G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C LQGF +
Sbjct: 77 RAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMT 136
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LL+ ++ +Y + + ++ P P+V VVEPYN+ L+ H
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNATLSVH 190
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 98.3 bits (234), Expect = 1e-21
Identities = 46/114 (40%), Positives = 66/114 (57%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
R+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD IRK A+ C LQGF +
Sbjct: 77 RSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLT 136
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LL+ ++ +Y + ++ P P+V VVEPYN+ L+ H
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVH 190
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 97.9 bits (233), Expect = 2e-21
Identities = 45/114 (39%), Positives = 66/114 (57%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
R+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C LQGF +
Sbjct: 77 RSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLT 136
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LL+ ++ +Y + ++ P P+V VVEPYN+ L+ H
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVH 190
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 96.7 bits (230), Expect = 4e-21
Identities = 45/114 (39%), Positives = 66/114 (57%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
R+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD IRK A+ C LQGF +
Sbjct: 77 RSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLT 136
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LL+ ++ ++ + ++ P P+V VVEPYN+ L+ H
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYNATLSVH 190
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 93.5 bits (222), Expect = 4e-20
Identities = 44/114 (38%), Positives = 65/114 (57%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
R+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ LQGF +
Sbjct: 77 RSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLT 136
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LL+ ++ +Y + ++ P P+V VVEPYN+ L+ H
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVH 190
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 93.5 bits (222), Expect = 4e-20
Identities = 44/114 (38%), Positives = 65/114 (57%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
R+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ LQGF +
Sbjct: 77 RSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLT 136
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILTTH 351
H LL+ ++ +Y + ++ P P+V VVEPYN+ L+ H
Sbjct: 137 HSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVH 190
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 89.4 bits (212), Expect = 6e-19
Identities = 44/112 (39%), Positives = 63/112 (56%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
R+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL IR+ A+ L+GF +
Sbjct: 77 RSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLI 136
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILT 345
H LL+ +L +Y K C+I P +V VVEPYN+IL+
Sbjct: 137 HSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILS 188
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 89.4 bits (212), Expect = 6e-19
Identities = 44/112 (39%), Positives = 63/112 (56%)
Frame = +1
Query: 10 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIF 189
R+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL IR+ A+ L+GF +
Sbjct: 77 RSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLI 136
Query: 190 HXXXXXXXXXXXXLLMERLSVDYGKKCKLECAIYPVPQVYTAVVEPYNSILT 345
H LL+ +L +Y K C+I P +V VVEPYN+IL+
Sbjct: 137 HSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILS 188
>Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical
protein C18D11.2 protein.
Length = 266
Score = 29.5 bits (63), Expect = 0.71
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Frame = -2
Query: 282 ALQFTLLAVVNGESL---HEERSETR-TGATTERVEDEESLEACALV-SEFADAVEDQV 121
A +F +L V+ G+ H +++E + T T+ VE S AC L +E+ADA++D++
Sbjct: 106 APKFEVLGVLEGKDQAVEHPKKTENKETENETDNVETPNS-SACILSDNEYADAIDDEI 163
>Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical
protein D2089.2 protein.
Length = 180
Score = 26.6 bits (56), Expect = 5.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 201 WWHRFWFHFSPHGA 242
WW FWF+F +GA
Sbjct: 146 WWMTFWFNFLYYGA 159
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 247 SVDYGKKCKLECAIYPVP-QVYTAVVEPYNSILTTH 351
SVDY + L P P QVY +PYNS ++H
Sbjct: 428 SVDYMHRNTLPLKPQPPPPQVYDIYSDPYNSDTSSH 463
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 247 SVDYGKKCKLECAIYPVP-QVYTAVVEPYNSILTTH 351
SVDY + L P P QVY +PYNS ++H
Sbjct: 327 SVDYMHRNTLPLKPQPPPPQVYDIYSDPYNSDTSSH 362
>Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical
protein H03G16.2 protein.
Length = 377
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 157 GQRVCGCGRGPSLRFPFQWCSDH 89
G +V C R PS+R + WCS++
Sbjct: 128 GVKVRVCIRPPSMRRRYSWCSEN 150
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
C16A3.3 protein.
Length = 1743
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -2
Query: 234 EERSETRTGATTERVEDEESLEACALVSEFADAVEDQVYD 115
EE SE E VEDEE E + E D ED+ D
Sbjct: 1422 EEESEEEEEEDEEEVEDEEVDEDASDEEEEVDGEEDESDD 1461
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 258 VVNGESLHEERSETRTGATTERVEDEE 178
+V+ E E+RS +GA ER D+E
Sbjct: 884 IVSSEQHEEDRSSATSGADYERSSDQE 910
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 258 VVNGESLHEERSETRTGATTERVEDEE 178
+V+ E E+RS +GA ER D+E
Sbjct: 1542 IVSSEQHEEDRSSATSGADYERSSDQE 1568
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,516,048
Number of Sequences: 27780
Number of extensions: 172719
Number of successful extensions: 503
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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