Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N22
         (352 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.34 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   0.79 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   0.79 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   0.79 
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    22   1.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   2.4  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   5.6  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    20   7.4  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    20   7.4  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    20   7.4  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    20   7.4  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    20   7.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    20   7.4  
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    20   9.8  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    20   9.8  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    20   9.8  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.34
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +3

Query: 93  SLHHWKGNRRLGPRPHPQTR*PMHRPPGIPHL 188
           S HH  GN  +GP   P      H+   + HL
Sbjct: 333 SPHHQHGNHTMGPTMGPPHHHHHHQTQSLQHL 364


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 255 VNGESLHEERSETRTGATTERVEDE 181
           V+ E+ H ERS  R+ A    ++DE
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDE 278


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 255 VNGESLHEERSETRTGATTERVEDE 181
           V+ E+ H ERS  R+ A    ++DE
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDE 278


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 255 VNGESLHEERSETRTGATTERVEDE 181
           V+ E+ H ERS  R+ A    ++DE
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDE 278


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 88  RGHY-TIGKEIVDLVLDRIRKLADQCTGLQ 174
           RGH   IGK+I +L+ + +    ++CT  Q
Sbjct: 43  RGHCDVIGKKIKELLPEVLNNHCNRCTSRQ 72


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 314 AVYTWGTG*IAHSNLHFLP 258
           A+ T   G IAH++ HF P
Sbjct: 10  ALLTLAAGEIAHNDPHFAP 28


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 279 VRYLSRTPGVHCCCRALQLYP 341
           V+Y +R   +  C    QLYP
Sbjct: 104 VKYSARMHAIIACQMEFQLYP 124


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 117 DFLSNGVVTTSIVVCGILLTS 55
           DF+ N +  TS   C +L+ +
Sbjct: 97  DFIKNMITGTSQADCAVLIVA 117


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 117 DFLSNGVVTTSIVVCGILLTS 55
           DF+ N +  TS   C +L+ +
Sbjct: 24  DFIKNMITGTSQADCAVLIVA 44


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 117 DFLSNGVVTTSIVVCGILLTS 55
           DF+ N +  TS   C +L+ +
Sbjct: 40  DFIKNMITGTSQADCAVLIVA 60


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
          protein.
          Length = 492

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 20 HTDSCFIQNNLSLVRRMPQTTM 85
          H D   ++    LVR  P+T +
Sbjct: 34 HNDPLVVETTSGLVRGFPRTVL 55


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 117 DFLSNGVVTTSIVVCGILLTS 55
           DF+ N +  TS   C +L+ +
Sbjct: 97  DFIKNMITGTSQADCAVLIVA 117


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
          protein.
          Length = 628

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 20 HTDSCFIQNNLSLVRRMPQTTM 85
          H D   ++    LVR  P+T +
Sbjct: 34 HNDPLVVETTSGLVRGFPRTVL 55


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = -2

Query: 99  VVTTSIVVCGILLTSDKLFWMKQLSVCAS 13
           +++ ++++  IL  S    W K +  C S
Sbjct: 27  LISYALILFNILHMSSAEGWFKAIGTCGS 55


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 58  GKEDAANNYARGHYTIG 108
           GK DAA  Y     T+G
Sbjct: 264 GKRDAAGIYGSNSSTVG 280


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 58  GKEDAANNYARGHYTIG 108
           GK DAA  Y     T+G
Sbjct: 264 GKRDAAGIYGSNSSTVG 280


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,859
Number of Sequences: 438
Number of extensions: 2365
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8060325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)