Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_N21
(301 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1305 - 25638531-25638584,25638909-25638990,25639087-256391... 71 2e-13
03_03_0210 + 15470680-15470715,15473088-15473342,15473417-154734... 70 3e-13
02_05_1031 - 33626527-33626580,33627482-33627563,33628892-33628911 57 2e-09
04_04_0390 - 24882572-24882577,24882928-24883009,24883089-248832... 48 1e-06
01_07_0198 - 41918276-41918408,41918486-41918841,41919091-419192... 29 0.51
08_01_0996 + 10089800-10090149,10090426-10090483,10092922-100931... 29 0.67
03_03_0090 + 14367033-14367279,14367402-14368205,14368314-143700... 28 1.6
04_03_1019 + 21759368-21760546 27 2.1
10_03_0046 + 7357777-7357992 26 4.7
09_04_0499 + 18108553-18108633,18108733-18108971,18109261-181093... 26 4.7
07_03_0730 + 21030123-21030338 26 4.7
06_03_0649 + 23138442-23138842,23139576-23139849,23139929-231405... 26 4.7
01_07_0255 - 42322111-42322308,42322658-42322750,42323127-423233... 26 4.7
01_06_1064 + 34237919-34238155 26 4.7
08_01_1038 + 10540185-10540709 26 6.3
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 26 6.3
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 26 6.3
02_05_1337 - 35780076-35780290,35780377-35780408,35780490-357805... 26 6.3
02_05_0272 - 27348537-27348728,27349035-27349192,27349292-273493... 26 6.3
10_01_0352 - 3870921-3871272,3871383-3871479,3871541-3871621,387... 25 8.3
07_03_0527 - 19085828-19086319 25 8.3
07_01_0117 + 894314-896677 25 8.3
06_03_1494 + 30554997-30555608,30555707-30555915,30556006-305561... 25 8.3
01_05_0067 - 17799260-17799615,17799736-17800134,17800400-17800412 25 8.3
>07_03_1305 -
25638531-25638584,25638909-25638990,25639087-25639169,
25639252-25639515,25639984-25640060,25640183-25640277,
25640953-25641065
Length = 255
Score = 70.5 bits (165), Expect = 2e-13
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +3
Query: 21 PNQNQ-RVCYQSYLDFHRCQKVRGKNYDPCYYFQRVYKSMCPNEWVDKWDNQRAEGTFAG 197
P NQ R C+ Y+++HRC +G+ C F + Y+S+CP+EW+++W+ QR GTF G
Sbjct: 194 PTTNQTRHCFTRYIEYHRCVAAKGEGAPECEKFAKYYRSLCPSEWIERWNEQRENGTFPG 253
>03_03_0210 +
15470680-15470715,15473088-15473342,15473417-15473499,
15473617-15473698,15474886-15474939
Length = 169
Score = 70.1 bits (164), Expect = 3e-13
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +3
Query: 21 PNQNQ-RVCYQSYLDFHRCQKVRGKNYDPCYYFQRVYKSMCPNEWVDKWDNQRAEGTFAG 197
P NQ R C+ Y+++HRC +G++ C F + Y+S+CP EWV++W+ QR GTF G
Sbjct: 108 PTTNQTRHCFTRYVEYHRCVAAKGEDAPECDKFAKYYRSLCPGEWVERWNEQRENGTFPG 167
>02_05_1031 - 33626527-33626580,33627482-33627563,33628892-33628911
Length = 51
Score = 57.2 bits (132), Expect = 2e-09
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 72 CQKVRGKNYDPCYYFQRVYKSMCPNEWVDKWDNQRAEGTFAG 197
C + +G+ D C + + Y+S+CP EW+++W QRA GTFAG
Sbjct: 8 CIEAKGEGSDECTKYAKCYRSLCPGEWIERWKEQRANGTFAG 49
>04_04_0390 -
24882572-24882577,24882928-24883009,24883089-24883200,
24883411-24883441
Length = 76
Score = 48.4 bits (110), Expect = 1e-06
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 21 PNQNQ-RVCYQSYLDFHRCQKVRGKNYDPCYYFQRVYKSMCPNEW 152
P NQ R C+ Y+++HRC +G+ C F + Y+S+CP EW
Sbjct: 31 PTTNQTRHCFTRYIEYHRCVNAKGEATADCEKFAKYYRSLCPAEW 75
>01_07_0198 - 41918276-41918408,41918486-41918841,41919091-41919237,
41919666-41921789,41922150-41922344,41922488-41922568,
41923325-41923414,41923507-41923593,41923914-41923961
Length = 1086
Score = 29.5 bits (63), Expect = 0.51
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 189 RFPPRAGCPICRPTRWDTWTCRPAGN-SSTGRNSCRGPSGIDGSLNNSDSRLVGFG*ELG 13
+ PP +G P+ P+ + G+ SS G GP+G+ S S R+ E+G
Sbjct: 941 KLPPLSGFPM--PSELSSMATESLGSPSSVGEQISNGPNGLLASNGPSSVRIKAGHPEVG 998
Query: 12 RRGS 1
+ GS
Sbjct: 999 KNGS 1002
>08_01_0996 +
10089800-10090149,10090426-10090483,10092922-10093126,
10093201-10093280,10093377-10093477,10093566-10093691,
10094099-10094101,10094736-10094763,10094875-10094961,
10095187-10095273,10095346-10095411,10095511-10095603,
10095688-10095744,10095834-10095959,10096049-10096139,
10096233-10096321,10096951-10097141,10097224-10097322,
10098814-10098829
Length = 650
Score = 29.1 bits (62), Expect = 0.67
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 134 GLVDPLEIVARVVILAADLLASMEV*ITLIADSLVLVR 21
G+ DPLE+VA + A +L E +T +AD+++L R
Sbjct: 350 GVSDPLEVVAAEISDEAIILCLDEFMVTDVADAMILNR 387
>03_03_0090 +
14367033-14367279,14367402-14368205,14368314-14370039,
14370135-14370219,14370398-14370457,14370744-14370836
Length = 1004
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 142 PTSGSTNGTTSARREPSPAGFKLFQSTLVIYYDYF*R*VEQC 267
PTS NG SA+ + SP+G FQ+ L I D+ + +C
Sbjct: 687 PTSTGFNGVPSAQIQTSPSGL-TFQNMLDICSDFSRLTISEC 727
>04_03_1019 + 21759368-21760546
Length = 392
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 130 SPCVPTSGSTNGTTSARREPSPA 198
S +PTSG+T+ +TS PSP+
Sbjct: 249 SEILPTSGATSSSTSGHSVPSPS 271
>10_03_0046 + 7357777-7357992
Length = 71
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 135 WTCRPAGNSSTGRNSCRGPSGIDG 64
W CRPA ST R S R G G
Sbjct: 32 WWCRPASGRSTERVSGREVGGFGG 55
>09_04_0499 +
18108553-18108633,18108733-18108971,18109261-18109363,
18109505-18109642
Length = 186
Score = 26.2 bits (55), Expect = 4.7
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 212 NNLNPAGEGSLRALVVPFVDPLVGTHGLVDPLEIVARVVILAADLLASME 63
N + G GS RA+ V V G HG+ PL + VI A+ E
Sbjct: 81 NTAHVHGNGSERAVDVAVVGKSGGKHGIKSPLNEGLKCVISVVPGAANQE 130
>07_03_0730 + 21030123-21030338
Length = 71
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 135 WTCRPAGNSSTGRNSCRGPSGIDG 64
W CRPA ST R S R G G
Sbjct: 32 WWCRPASGRSTERVSGREVGGFGG 55
>06_03_0649 +
23138442-23138842,23139576-23139849,23139929-23140562,
23140771-23140826,23141178-23141282,23141295-23141535,
23142686-23142690
Length = 571
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 130 SPCVPTSGSTNGTTSARREPSPAG 201
SP PTS +GT++A R P P G
Sbjct: 86 SPAAPTSSLASGTSTA-RPPQPQG 108
>01_07_0255 -
42322111-42322308,42322658-42322750,42323127-42323344,
42323476-42323642,42324097-42324207,42324267-42324409,
42324492-42324710,42324975-42325055,42325202-42325381,
42325971-42326301,42326775-42326888,42327036-42327127,
42327631-42328059
Length = 791
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 230 ITRVLWNNLNPAGEGSLRALVVPFVDPLVGTHGLV 126
I R+ W NPA G ++ +V VD L G G +
Sbjct: 137 IDRIAWQPCNPAVGGPAKSQLVHEVDALGGEMGKI 171
>01_06_1064 + 34237919-34238155
Length = 78
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 135 WTCRPAGNSSTGRNSCRGPSGIDG 64
W CRPA ST R S R G G
Sbjct: 32 WWCRPASGRSTERVSGREVGGFGG 55
>08_01_1038 + 10540185-10540709
Length = 174
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -2
Query: 135 WTCRPAGNSSTGRNSCRGPSGIDGSLNNSDSRLVGFG*ELGRRGS 1
WT P G G G G G L R G G GRR S
Sbjct: 14 WTASPVGGGGVGLGGGSGLGGGGGGLGKGGVRGGGGGLGGGRRRS 58
>04_04_0824 - 28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 162 ICRPTRWDTWTCRPAGNSSTGR 97
IC PT +D + C AG T R
Sbjct: 1075 ICHPTEFDFYLCSHAGIQGTSR 1096
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 162 ICRPTRWDTWTCRPAGNSSTGR 97
IC PT +D + C AG T R
Sbjct: 921 ICHPTEFDFYLCSHAGIQGTSR 942
>02_05_1337 -
35780076-35780290,35780377-35780408,35780490-35780584,
35780670-35780743,35780851-35780986,35781072-35781135,
35781333-35781395,35781514-35781656,35781752-35781889,
35781973-35782094,35782210-35782375,35782647-35782652,
35782988-35783059,35783241-35783348,35783719-35783848,
35783964-35784070,35784896-35785005,35785302-35785435,
35785528-35785982,35786068-35786595
Length = 965
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 162 ICRPTRWDTWTCRPAGNSSTGR 97
IC PT +D + C AG T R
Sbjct: 835 ICHPTEFDFYLCSHAGIKGTSR 856
>02_05_0272 -
27348537-27348728,27349035-27349192,27349292-27349323,
27349420-27349514,27349614-27349687,27349800-27349878,
27350015-27350078,27350156-27350218,27350300-27350442,
27350566-27350703,27350792-27350913,27350993-27351158,
27351276-27351398,27351609-27351680,27351773-27351880,
27352481-27352597,27352727-27352865,27352974-27353080,
27353167-27353276,27353892-27354025,27354106-27354255,
27354329-27354549,27354647-27355318
Length = 1092
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 162 ICRPTRWDTWTCRPAGNSSTGR 97
IC PT +D + C AG T R
Sbjct: 917 ICHPTEFDFYLCSHAGIQGTSR 938
>10_01_0352 -
3870921-3871272,3871383-3871479,3871541-3871621,
3874854-3875028,3875650-3875661
Length = 238
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 75 GIDGSLNNSDSRLVGFG*ELGRRG 4
G + + L+GFG ELGRRG
Sbjct: 69 GFNLDFGGGEGLLMGFGLELGRRG 92
>07_03_0527 - 19085828-19086319
Length = 163
Score = 25.4 bits (53), Expect = 8.3
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -2
Query: 135 WTCRPAGNSSTGRNSCRGPSGIDGSLNNSDSRLVGFG*ELGRRGS 1
W P G TG G G G L R G G GRR S
Sbjct: 14 WRASPVGGGGTGLGGGSGLGGGGGGLGEGGVRGGGGGLGGGRRRS 58
>07_01_0117 + 894314-896677
Length = 787
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 121 GSTSPCVPTSGSTNGTTSARREPSPAGFKLFQSTLVIYYDY 243
G P +S S+ GT +R A FK+ + L YDY
Sbjct: 273 GLLQPVASSSSSSQGTGGSRGNYERA-FKVIEVELAFMYDY 312
>06_03_1494 +
30554997-30555608,30555707-30555915,30556006-30556155,
30556254-30556312,30556852-30556961,30557216-30557322,
30557443-30557581,30557705-30557821,30557918-30558025,
30558221-30558292,30558783-30558948,30559044-30559165,
30559245-30559382,30559462-30559604,30559699-30559761,
30560107-30560170,30560238-30560373,30560478-30560551,
30560640-30560734,30560829-30560860,30560973-30561175
Length = 972
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 162 ICRPTRWDTWTCRPAGNSSTGR 97
IC PT +D + C AG T R
Sbjct: 846 ICHPTEFDFFLCSHAGIKGTSR 867
>01_05_0067 - 17799260-17799615,17799736-17800134,17800400-17800412
Length = 255
Score = 25.4 bits (53), Expect = 8.3
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -1
Query: 280 IELNHIARPIVKNNRNKLQECF 215
++ +H+ R + KN + K+ +CF
Sbjct: 75 VKEDHVGRKVKKNKKKKMVQCF 96
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,635,019
Number of Sequences: 37544
Number of extensions: 187731
Number of successful extensions: 600
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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