Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N21
         (301 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2928|AAN09514.1|   77|Drosophila melanogaster CG14235-P...   114   2e-26
AE014298-2927|AAN09513.1|   77|Drosophila melanogaster CG14235-P...   114   2e-26
AE014298-2926|AAF49015.2|   96|Drosophila melanogaster CG14235-P...   114   2e-26
BT016064-1|AAV36949.1|  251|Drosophila melanogaster LP13353p pro...    29   0.82 
AL050231-3|CAB65851.1|  674|Drosophila melanogaster EG:BACR37P7....    29   0.82 
AE014296-3369|AAF51603.2|  251|Drosophila melanogaster CG5910-PA...    29   0.82 
X58983-1|CAA41732.1|  671|Drosophila melanogaster orthodenticle ...    28   2.5  
AE014298-1217|AAF46400.3|  671|Drosophila melanogaster CG12154-P...    28   2.5  
AE014298-1216|AAX52481.1|  665|Drosophila melanogaster CG12154-P...    28   2.5  
AY061541-1|AAL29089.1|  392|Drosophila melanogaster LP03039p pro...    27   3.3  
AE014297-3637|ABC66187.1|  392|Drosophila melanogaster CG6995-PC...    27   3.3  
BT024949-1|ABE01179.1|  176|Drosophila melanogaster IP15852p pro...    27   4.4  
BT023893-1|ABA81827.1|  294|Drosophila melanogaster LP21102p pro...    27   4.4  
AE014298-485|AAF45841.1|  294|Drosophila melanogaster CG14422-PA...    27   4.4  
AE014297-4492|AAF56978.3| 3731|Drosophila melanogaster CG15523-P...    27   4.4  
U88570-1|AAB53050.1| 3190|Drosophila melanogaster CREB-binding p...    26   7.7  
AE014298-1361|AAF46516.2| 3276|Drosophila melanogaster CG15319-P...    26   7.7  

>AE014298-2928|AAN09514.1|   77|Drosophila melanogaster CG14235-PC,
           isoform C protein.
          Length = 77

 Score =  114 bits (274), Expect = 2e-26
 Identities = 48/68 (70%), Positives = 56/68 (82%), Gaps = 2/68 (2%)
 Frame = +3

Query: 6   PFD-QVPNQN-QRVCYQSYLDFHRCQKVRGKNYDPCYYFQRVYKSMCPNEWVDKWDNQRA 179
           PFD + PNQN  R CYQSY+DFHRCQK RG+++ PC YFQ+VYKSMCPN WV+KWD+QR 
Sbjct: 10  PFDPRFPNQNVTRYCYQSYIDFHRCQKKRGEDFAPCNYFQKVYKSMCPNAWVEKWDDQRE 69

Query: 180 EGTFAGRI 203
            GTF GRI
Sbjct: 70  SGTFPGRI 77


>AE014298-2927|AAN09513.1|   77|Drosophila melanogaster CG14235-PB,
           isoform B protein.
          Length = 77

 Score =  114 bits (274), Expect = 2e-26
 Identities = 48/68 (70%), Positives = 56/68 (82%), Gaps = 2/68 (2%)
 Frame = +3

Query: 6   PFD-QVPNQN-QRVCYQSYLDFHRCQKVRGKNYDPCYYFQRVYKSMCPNEWVDKWDNQRA 179
           PFD + PNQN  R CYQSY+DFHRCQK RG+++ PC YFQ+VYKSMCPN WV+KWD+QR 
Sbjct: 10  PFDPRFPNQNVTRYCYQSYIDFHRCQKKRGEDFAPCNYFQKVYKSMCPNAWVEKWDDQRE 69

Query: 180 EGTFAGRI 203
            GTF GRI
Sbjct: 70  SGTFPGRI 77


>AE014298-2926|AAF49015.2|   96|Drosophila melanogaster CG14235-PA,
           isoform A protein.
          Length = 96

 Score =  114 bits (274), Expect = 2e-26
 Identities = 48/68 (70%), Positives = 56/68 (82%), Gaps = 2/68 (2%)
 Frame = +3

Query: 6   PFD-QVPNQN-QRVCYQSYLDFHRCQKVRGKNYDPCYYFQRVYKSMCPNEWVDKWDNQRA 179
           PFD + PNQN  R CYQSY+DFHRCQK RG+++ PC YFQ+VYKSMCPN WV+KWD+QR 
Sbjct: 29  PFDPRFPNQNVTRYCYQSYIDFHRCQKKRGEDFAPCNYFQKVYKSMCPNAWVEKWDDQRE 88

Query: 180 EGTFAGRI 203
            GTF GRI
Sbjct: 89  SGTFPGRI 96


>BT016064-1|AAV36949.1|  251|Drosophila melanogaster LP13353p
           protein.
          Length = 251

 Score = 29.5 bits (63), Expect = 0.82
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 75  QKVRGKNYDPCYYFQRVYKSMCPNEWVDKW 164
           QKV   + + C+ F +V +  C   W+ KW
Sbjct: 180 QKVHTSSVESCFTFVQVKECCCAEIWIKKW 209


>AL050231-3|CAB65851.1|  674|Drosophila melanogaster
           EG:BACR37P7.3,FBgn0000316;cin protein.
          Length = 674

 Score = 29.5 bits (63), Expect = 0.82
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 102 PCYYFQRVYKSMCPNEWVDKWDNQRAEGTF 191
           PC   ++ ++  CP +WV  +D +R    F
Sbjct: 41  PCQSLRKSFEQSCPGQWVKHFDRKRTYDQF 70


>AE014296-3369|AAF51603.2|  251|Drosophila melanogaster CG5910-PA
           protein.
          Length = 251

 Score = 29.5 bits (63), Expect = 0.82
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 75  QKVRGKNYDPCYYFQRVYKSMCPNEWVDKW 164
           QKV   + + C+ F +V +  C   W+ KW
Sbjct: 180 QKVHTSSVESCFTFVQVKECCCAEIWIKKW 209


>X58983-1|CAA41732.1|  671|Drosophila melanogaster orthodenticle
           protein.
          Length = 671

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -2

Query: 198 CRRRFPPRAGCPICRPTRWDTW-TCR 124
           CR R P RA CP  RP+    W TCR
Sbjct: 533 CRHRHPSRAPCP-RRPSPRTAWITCR 557


>AE014298-1217|AAF46400.3|  671|Drosophila melanogaster CG12154-PA,
           isoform A protein.
          Length = 671

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -2

Query: 198 CRRRFPPRAGCPICRPTRWDTW-TCR 124
           CR R P RA CP  RP+    W TCR
Sbjct: 533 CRHRHPSRAPCP-RRPSPRTAWITCR 557


>AE014298-1216|AAX52481.1|  665|Drosophila melanogaster CG12154-PB,
           isoform B protein.
          Length = 665

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -2

Query: 198 CRRRFPPRAGCPICRPTRWDTW-TCR 124
           CR R P RA CP  RP+    W TCR
Sbjct: 527 CRHRHPSRAPCP-RRPSPRTAWITCR 551


>AY061541-1|AAL29089.1|  392|Drosophila melanogaster LP03039p
           protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 66  HRCQKVRGKNYD-PCYYFQRVYKSMCP 143
           H CQ+ RG N D P Y F  + +S+CP
Sbjct: 365 HSCQR-RGDNTDIPIYLFYTLSESICP 390


>AE014297-3637|ABC66187.1|  392|Drosophila melanogaster CG6995-PC,
           isoform C protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 66  HRCQKVRGKNYD-PCYYFQRVYKSMCP 143
           H CQ+ RG N D P Y F  + +S+CP
Sbjct: 365 HSCQR-RGDNTDIPIYLFYTLSESICP 390


>BT024949-1|ABE01179.1|  176|Drosophila melanogaster IP15852p
           protein.
          Length = 176

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 124 STSPCVPTSGSTNGTTSARR 183
           ST+   PT+ STN TT+ARR
Sbjct: 114 STTTTTPTTTSTNPTTTARR 133


>BT023893-1|ABA81827.1|  294|Drosophila melanogaster LP21102p
           protein.
          Length = 294

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 124 STSPCVPTSGSTNGTTSARR 183
           ST+   PT+ STN TT+ARR
Sbjct: 93  STTTTTPTTTSTNPTTTARR 112


>AE014298-485|AAF45841.1|  294|Drosophila melanogaster CG14422-PA
           protein.
          Length = 294

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 124 STSPCVPTSGSTNGTTSARR 183
           ST+   PT+ STN TT+ARR
Sbjct: 93  STTTTTPTTTSTNPTTTARR 112


>AE014297-4492|AAF56978.3| 3731|Drosophila melanogaster CG15523-PA
            protein.
          Length = 3731

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 96   YDPCYYFQRVYKSMCPNEWVDKW 164
            ++ C    ++Y S+CP+E   KW
Sbjct: 1117 HEHCLIISKMYGSLCPDEPASKW 1139


>U88570-1|AAB53050.1| 3190|Drosophila melanogaster CREB-binding
            protein homolog protein.
          Length = 3190

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 204  KSCRRRFPPRAGCPICR 154
            K+C+R+  P  GCPIC+
Sbjct: 2433 KNCKRK--PNGGCPICK 2447


>AE014298-1361|AAF46516.2| 3276|Drosophila melanogaster CG15319-PB
            protein.
          Length = 3276

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 204  KSCRRRFPPRAGCPICR 154
            K+C+R+  P  GCPIC+
Sbjct: 2433 KNCKRK--PNGGCPICK 2447


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,022,395
Number of Sequences: 53049
Number of extensions: 301655
Number of successful extensions: 1401
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)