Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N21
         (301 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   0.81 
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   2.5  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   2.5  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   4.3  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   4.3  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   4.3  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    20   5.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   7.6  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 0.81
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 120 RVYKSMCPNEWVDKWDNQRAEGTFAGRI 203
           R++     NE VDK  N+RA G    +I
Sbjct: 376 RIFSPHEENESVDKHPNRRARGQLRTKI 403


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 207 IIPKHSCNLLRLFLTIG 257
           I+ +HS  L+ LFL++G
Sbjct: 125 ILLEHSSKLVELFLSLG 141


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 72  CQKVRGKNYD 101
           CQ+V GKNY+
Sbjct: 49  CQEVGGKNYE 58


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 121 GSTSPCVPTSGSTNGTTSA 177
           G+TS  VP  GST  +++A
Sbjct: 113 GATSSMVPGFGSTAASSAA 131


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 136 CVPTSGSTN 162
           C+PTSGS N
Sbjct: 114 CLPTSGSDN 122


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 136 CVPTSGSTN 162
           C+PTSGS N
Sbjct: 114 CLPTSGSDN 122


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
          peptide protein.
          Length = 50

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 42 CYQSYLDFHRCQKVRGKN 95
          C +  +  H C+K+ GKN
Sbjct: 32 CKRHVIKPHICRKICGKN 49


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 99  RNSCRGPSGIDGSLNNSDSRL 37
           R+ CR P   D S+N   S++
Sbjct: 409 RDGCRTPFQWDNSINAGFSKI 429


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,428
Number of Sequences: 438
Number of extensions: 1898
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6244050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)