Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_N20
(357 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 166 2e-41
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 166 2e-41
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 166 2e-41
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 166 2e-41
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 166 2e-41
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 166 2e-41
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 166 2e-41
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 166 2e-41
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 166 2e-41
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 166 2e-41
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 166 2e-41
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 166 2e-41
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 166 2e-41
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 166 2e-41
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 166 2e-41
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 165 4e-41
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 163 1e-40
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 163 1e-40
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 158 5e-39
BC031044-1|AAH31044.2| 312|Homo sapiens DNAJA4 protein protein. 32 0.45
BC021720-1|AAH21720.1| 397|Homo sapiens DnaJ (Hsp40) homolog, s... 32 0.45
AK098079-1|BAC05229.1| 426|Homo sapiens protein ( Homo sapiens ... 32 0.45
AK096616-1|BAC04828.1| 397|Homo sapiens protein ( Homo sapiens ... 32 0.45
AK090898-1|BAC03540.1| 239|Homo sapiens protein ( Homo sapiens ... 32 0.45
EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia compleme... 29 3.2
EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia compleme... 29 3.2
AK124794-1|BAC85951.1| 244|Homo sapiens protein ( Homo sapiens ... 29 3.2
AK027564-1|BAB55200.1| 906|Homo sapiens protein ( Homo sapiens ... 29 3.2
AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens ... 29 3.2
AB058697-1|BAB47423.1| 802|Homo sapiens KIAA1794 protein protein. 29 3.2
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 166 bits (404), Expect = 2e-41
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 165 bits (401), Expect = 4e-41
Identities = 77/104 (74%), Positives = 88/104 (84%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMG+NTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGRNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 163 bits (396), Expect = 1e-40
Identities = 78/104 (75%), Positives = 86/104 (82%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG +VLMGKNTMMRKAI+ HLE NPALEKLLPHI GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKVVVLMGKNTMMRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 163 bits (396), Expect = 1e-40
Identities = 77/104 (74%), Positives = 87/104 (83%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKV 107
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSF QAL I TKIS+GT
Sbjct: 108 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFSQALGITTKISRGT 151
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 158 bits (383), Expect = 5e-39
Identities = 76/104 (73%), Positives = 87/104 (83%)
Frame = +1
Query: 46 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKV 225
RG ++VLMGKNTMMRKAI+ HLE NPALEKLLP ++GNVGFVFT+ DL ++RD LL +KV
Sbjct: 48 RGKAVVLMGKNTMMRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKV 106
Query: 226 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 357
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GT
Sbjct: 107 PAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGT 150
>BC031044-1|AAH31044.2| 312|Homo sapiens DNAJA4 protein protein.
Length = 312
Score = 32.3 bits (70), Expect = 0.45
Identities = 29/101 (28%), Positives = 44/101 (43%)
Frame = +1
Query: 34 VFHWRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLL 213
VF RGH +++ K + +A+ +T L+ + I G V GDL VRD+ +
Sbjct: 166 VFQRRGHDLIMKMK-IQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGM 224
Query: 214 ESKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIP 336
+AP G + +VI L EK +AL P
Sbjct: 225 PI-YKAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPP 264
>BC021720-1|AAH21720.1| 397|Homo sapiens DnaJ (Hsp40) homolog,
subfamily A, member 4 protein.
Length = 397
Score = 32.3 bits (70), Expect = 0.45
Identities = 29/101 (28%), Positives = 44/101 (43%)
Frame = +1
Query: 34 VFHWRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLL 213
VF RGH +++ K + +A+ +T L+ + I G V GDL VRD+ +
Sbjct: 251 VFQRRGHDLIMKMK-IQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGM 309
Query: 214 ESKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIP 336
+AP G + +VI L EK +AL P
Sbjct: 310 PI-YKAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPP 349
>AK098079-1|BAC05229.1| 426|Homo sapiens protein ( Homo sapiens
cDNA FLJ40760 fis, clone TRACH2002803, highly similar to
Mus musculus mmDNAJA4 mRNA for mmDj4. ).
Length = 426
Score = 32.3 bits (70), Expect = 0.45
Identities = 29/101 (28%), Positives = 44/101 (43%)
Frame = +1
Query: 34 VFHWRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLL 213
VF RGH +++ K + +A+ +T L+ + I G V GDL VRD+ +
Sbjct: 280 VFQRRGHDLIMKMK-IQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGM 338
Query: 214 ESKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIP 336
+AP G + +VI L EK +AL P
Sbjct: 339 PI-YKAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPP 378
>AK096616-1|BAC04828.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ39297 fis, clone OCBBF2012812, highly similar to
Mus musculus mmDNAJA4 mRNA for mmDj4. ).
Length = 397
Score = 32.3 bits (70), Expect = 0.45
Identities = 29/101 (28%), Positives = 44/101 (43%)
Frame = +1
Query: 34 VFHWRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLL 213
VF RGH +++ K + +A+ +T L+ + I G V GDL VRD+ +
Sbjct: 251 VFQRRGHDLIMKMK-IQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGM 309
Query: 214 ESKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIP 336
+AP G + +VI L EK +AL P
Sbjct: 310 PI-YKAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPP 349
>AK090898-1|BAC03540.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ33579 fis, clone BRAMY2011767, highly similar to
Mus musculus mmDNAJA4 mRNA for mmDj4. ).
Length = 239
Score = 32.3 bits (70), Expect = 0.45
Identities = 29/101 (28%), Positives = 44/101 (43%)
Frame = +1
Query: 34 VFHWRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLL 213
VF RGH +++ K + +A+ +T L+ + I G V GDL VRD+ +
Sbjct: 93 VFQRRGHDLIMKMK-IQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGM 151
Query: 214 ESKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIP 336
+AP G + +VI L EK +AL P
Sbjct: 152 PI-YKAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPP 191
>EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia
complementation group I protein.
Length = 1328
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 92 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 211
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 636 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 674
>EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia
complementation group I isoform 3 protein.
Length = 1328
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 92 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 211
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 636 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 674
>AK124794-1|BAC85951.1| 244|Homo sapiens protein ( Homo sapiens
cDNA FLJ42804 fis, clone BRCAN2002856, highly similar
to AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY A
MEMBER 2. ).
Length = 244
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 49 GHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLESKVQ 228
G+ +VLM + M R A +D +ET P ++ K + VF D+ KV
Sbjct: 156 GNIVVLMARRRMPRSASQDCIETTPGAQEGKKQYK-MICHVFESEDVSKPLPGHSPPKVH 214
Query: 229 APAR---PGAI 252
+P R PGA+
Sbjct: 215 SPGRLQDPGAV 225
>AK027564-1|BAB55200.1| 906|Homo sapiens protein ( Homo sapiens
cDNA FLJ14658 fis, clone NT2RP2002549. ).
Length = 906
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 92 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 211
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 274 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 312
>AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens
cDNA FLJ10719 fis, clone NT2RP3001109. ).
Length = 1084
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 92 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 211
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 457 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 495
>AB058697-1|BAB47423.1| 802|Homo sapiens KIAA1794 protein protein.
Length = 802
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 92 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 211
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 110 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,272,189
Number of Sequences: 237096
Number of extensions: 1213204
Number of successful extensions: 3067
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3066
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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