Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_N18
(191 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75190-1|CAA99509.1| 699|Homo sapiens apolipoprotein E receptor... 28 4.6
D86407-2|BAA21825.1| 793|Homo sapiens ApoER2delta4-7 protein. 28 4.6
D86407-1|BAA21824.1| 963|Homo sapiens ApoER2 protein. 28 4.6
D50678-1|BAA09328.1| 963|Homo sapiens apolipoprotein E receptor... 28 4.6
BC051836-1|AAH51836.2| 904|Homo sapiens low density lipoprotein... 28 4.6
AL606760-4|CAI18908.1| 963|Homo sapiens low density lipoprotein... 28 4.6
AL606760-3|CAI18909.1| 700|Homo sapiens low density lipoprotein... 28 4.6
AL606760-2|CAI18910.1| 904|Homo sapiens low density lipoprotein... 28 4.6
AL355483-3|CAI22781.1| 963|Homo sapiens low density lipoprotein... 28 4.6
AL355483-2|CAI22782.1| 700|Homo sapiens low density lipoprotein... 28 4.6
AL355483-1|CAI22780.1| 904|Homo sapiens low density lipoprotein... 28 4.6
>Z75190-1|CAA99509.1| 699|Homo sapiens apolipoprotein E receptor 2
906 protein.
Length = 699
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -3
Query: 96 EH*QNPPKTILFQSIKRHRQPLTCDVTLVPN 4
E+ NP ++F +K+ R P C++++ PN
Sbjct: 537 ENLNNPHDIVIFHELKQPRAPDACELSVQPN 567
>D86407-2|BAA21825.1| 793|Homo sapiens ApoER2delta4-7 protein.
Length = 793
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -3
Query: 96 EH*QNPPKTILFQSIKRHRQPLTCDVTLVPN 4
E+ NP ++F +K+ R P C++++ PN
Sbjct: 497 ENLNNPHDIVIFHELKQPRAPDACELSVQPN 527
>D86407-1|BAA21824.1| 963|Homo sapiens ApoER2 protein.
Length = 963
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -3
Query: 96 EH*QNPPKTILFQSIKRHRQPLTCDVTLVPN 4
E+ NP ++F +K+ R P C++++ PN
Sbjct: 667 ENLNNPHDIVIFHELKQPRAPDACELSVQPN 697
>D50678-1|BAA09328.1| 963|Homo sapiens apolipoprotein E receptor 2
precursor protein.
Length = 963
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -3
Query: 96 EH*QNPPKTILFQSIKRHRQPLTCDVTLVPN 4
E+ NP ++F +K+ R P C++++ PN
Sbjct: 667 ENLNNPHDIVIFHELKQPRAPDACELSVQPN 697
>BC051836-1|AAH51836.2| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -3
Query: 96 EH*QNPPKTILFQSIKRHRQPLTCDVTLVPN 4
E+ NP ++F +K+ R P C++++ PN
Sbjct: 667 ENLNNPHDIVIFHELKQPRAPDACELSVQPN 697
>AL606760-4|CAI18908.1| 963|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 963
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -3
Query: 96 EH*QNPPKTILFQSIKRHRQPLTCDVTLVPN 4
E+ NP ++F +K+ R P C++++ PN
Sbjct: 667 ENLNNPHDIVIFHELKQPRAPDACELSVQPN 697
>AL606760-3|CAI18909.1| 700|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 700
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -3
Query: 96 EH*QNPPKTILFQSIKRHRQPLTCDVTLVPN 4
E+ NP ++F +K+ R P C++++ PN
Sbjct: 538 ENLNNPHDIVIFHELKQPRAPDACELSVQPN 568
>AL606760-2|CAI18910.1| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -3
Query: 96 EH*QNPPKTILFQSIKRHRQPLTCDVTLVPN 4
E+ NP ++F +K+ R P C++++ PN
Sbjct: 667 ENLNNPHDIVIFHELKQPRAPDACELSVQPN 697
>AL355483-3|CAI22781.1| 963|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 963
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -3
Query: 96 EH*QNPPKTILFQSIKRHRQPLTCDVTLVPN 4
E+ NP ++F +K+ R P C++++ PN
Sbjct: 667 ENLNNPHDIVIFHELKQPRAPDACELSVQPN 697
>AL355483-2|CAI22782.1| 700|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 700
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -3
Query: 96 EH*QNPPKTILFQSIKRHRQPLTCDVTLVPN 4
E+ NP ++F +K+ R P C++++ PN
Sbjct: 538 ENLNNPHDIVIFHELKQPRAPDACELSVQPN 568
>AL355483-1|CAI22780.1| 904|Homo sapiens low density lipoprotein
receptor-related protein 8, apolipoprotein e receptor
protein.
Length = 904
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -3
Query: 96 EH*QNPPKTILFQSIKRHRQPLTCDVTLVPN 4
E+ NP ++F +K+ R P C++++ PN
Sbjct: 667 ENLNNPHDIVIFHELKQPRAPDACELSVQPN 697
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,236,501
Number of Sequences: 237096
Number of extensions: 381268
Number of successful extensions: 435
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 76,859,062
effective HSP length: 43
effective length of database: 66,663,934
effective search space used: 1333278680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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