Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N16
         (344 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    85   7e-19
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.0  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   1.8  
AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450 pr...    22   5.6  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          21   9.7  
AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal ...    21   9.7  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 85.0 bits (201), Expect = 7e-19
 Identities = 36/60 (60%), Positives = 49/60 (81%)
 Frame = -2

Query: 259 TNVESGDRAAFSKVVQAIKTNFNERYEELRRHWGGGVLGNKSNARIAKLEKAKAREIAQK 80
           T  E+ D+   +K+V+ IKTNFN+R++++RRHWGGG+LG KS AR+AKLEKAK RE+ QK
Sbjct: 211 TQFENADKPNLAKLVETIKTNFNDRFDDIRRHWGGGLLGPKSMARLAKLEKAKKREMLQK 270



 Score = 55.2 bits (127), Expect = 6e-10
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -1

Query: 344 MGVPYCIVKGKSRLGALVHRKTCTSVAL 261
           MGVPYCI+KGK+RLG LV+RKTCT VAL
Sbjct: 183 MGVPYCIIKGKARLGTLVYRKTCTCVAL 210


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 229  FSKVVQAIKTNFNERYEELRRHWG 158
            FS+ +     NF+  + EL+R WG
Sbjct: 1856 FSRTIPFFGGNFSPEHTELQRTWG 1879


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 229  FSKVVQAIKTNFNERYEELRRHWG 158
            FS+ +     NF+  + EL+R WG
Sbjct: 1857 FSRTIPFFGGNFSPEHTELQRTWG 1880


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 267 RSSQMWSLETVPPSRR*CKLSRPTS 193
           RS   W     PP+RR  + +RPTS
Sbjct: 263 RSGGRWPSCRSPPARRRSRSTRPTS 287


>AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450
           protein.
          Length = 169

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 185 TLIEVGLDSLHYLRE 229
           TL+ +GLD++H  RE
Sbjct: 91  TLVLIGLDAIHNQRE 105


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 160 GGGVLGNKSNARIAKLEK 107
           GGGV+G+ S  R+  L +
Sbjct: 558 GGGVIGSGSTTRLPPLHQ 575


>AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal
           carrier protein TOL-2 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -2

Query: 259 TNVESGDRAAFSKVVQAIKTNFNERYEELR 170
           TN+ +GD+A    + Q +  N+ +  +EL+
Sbjct: 187 TNLFNGDKALGDNMNQFLNDNWEDILKELK 216


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 314,666
Number of Sequences: 2352
Number of extensions: 5131
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24505155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)