Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_N16
(344 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 104 4e-23
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 104 4e-23
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 104 4e-23
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 104 4e-23
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 104 4e-23
AY122076-1|AAM52588.1| 921|Drosophila melanogaster AT18175p pro... 31 0.30
AE014297-3108|AAF55959.3| 1364|Drosophila melanogaster CG5732-PA... 31 0.30
AY118621-1|AAM49990.1| 1168|Drosophila melanogaster RE03558p pro... 27 6.5
AE014296-813|AAF47875.2| 1168|Drosophila melanogaster CG1273-PB ... 27 6.5
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 104 bits (249), Expect = 4e-23
Identities = 46/75 (61%), Positives = 60/75 (80%)
Frame = -2
Query: 298 RLYTARLARASLFTNVESGDRAAFSKVVQAIKTNFNERYEELRRHWGGGVLGNKSNARIA 119
RL + T V++ D+A F KV++A+KTNFNER+EE+RRHWGGG+LG+KS ARI+
Sbjct: 197 RLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARIS 256
Query: 118 KLEKAKAREIAQKQG 74
KLE+AKARE+AQKQG
Sbjct: 257 KLERAKARELAQKQG 271
Score = 54.0 bits (124), Expect = 5e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 344 MGVPYCIVKGKSRLGALVHRKTCTSVAL 261
MGVPYCIVKGK+RLG LV RKTCT++AL
Sbjct: 182 MGVPYCIVKGKARLGRLVRRKTCTTLAL 209
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 104 bits (249), Expect = 4e-23
Identities = 46/75 (61%), Positives = 60/75 (80%)
Frame = -2
Query: 298 RLYTARLARASLFTNVESGDRAAFSKVVQAIKTNFNERYEELRRHWGGGVLGNKSNARIA 119
RL + T V++ D+A F KV++A+KTNFNER+EE+RRHWGGG+LG+KS ARI+
Sbjct: 197 RLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARIS 256
Query: 118 KLEKAKAREIAQKQG 74
KLE+AKARE+AQKQG
Sbjct: 257 KLERAKARELAQKQG 271
Score = 54.0 bits (124), Expect = 5e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 344 MGVPYCIVKGKSRLGALVHRKTCTSVAL 261
MGVPYCIVKGK+RLG LV RKTCT++AL
Sbjct: 182 MGVPYCIVKGKARLGRLVRRKTCTTLAL 209
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 104 bits (249), Expect = 4e-23
Identities = 46/75 (61%), Positives = 60/75 (80%)
Frame = -2
Query: 298 RLYTARLARASLFTNVESGDRAAFSKVVQAIKTNFNERYEELRRHWGGGVLGNKSNARIA 119
RL + T V++ D+A F KV++A+KTNFNER+EE+RRHWGGG+LG+KS ARI+
Sbjct: 197 RLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARIS 256
Query: 118 KLEKAKAREIAQKQG 74
KLE+AKARE+AQKQG
Sbjct: 257 KLERAKARELAQKQG 271
Score = 54.0 bits (124), Expect = 5e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 344 MGVPYCIVKGKSRLGALVHRKTCTSVAL 261
MGVPYCIVKGK+RLG LV RKTCT++AL
Sbjct: 182 MGVPYCIVKGKARLGRLVRRKTCTTLAL 209
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 104 bits (249), Expect = 4e-23
Identities = 46/75 (61%), Positives = 60/75 (80%)
Frame = -2
Query: 298 RLYTARLARASLFTNVESGDRAAFSKVVQAIKTNFNERYEELRRHWGGGVLGNKSNARIA 119
RL + T V++ D+A F KV++A+KTNFNER+EE+RRHWGGG+LG+KS ARI+
Sbjct: 197 RLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARIS 256
Query: 118 KLEKAKAREIAQKQG 74
KLE+AKARE+AQKQG
Sbjct: 257 KLERAKARELAQKQG 271
Score = 54.0 bits (124), Expect = 5e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 344 MGVPYCIVKGKSRLGALVHRKTCTSVAL 261
MGVPYCIVKGK+RLG LV RKTCT++AL
Sbjct: 182 MGVPYCIVKGKARLGRLVRRKTCTTLAL 209
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 104 bits (249), Expect = 4e-23
Identities = 46/75 (61%), Positives = 60/75 (80%)
Frame = -2
Query: 298 RLYTARLARASLFTNVESGDRAAFSKVVQAIKTNFNERYEELRRHWGGGVLGNKSNARIA 119
RL + T V++ D+A F KV++A+KTNFNER+EE+RRHWGGG+LG+KS ARI+
Sbjct: 197 RLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKSLARIS 256
Query: 118 KLEKAKAREIAQKQG 74
KLE+AKARE+AQKQG
Sbjct: 257 KLERAKARELAQKQG 271
Score = 54.0 bits (124), Expect = 5e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = -1
Query: 344 MGVPYCIVKGKSRLGALVHRKTCTSVAL 261
MGVPYCIVKGK+RLG LV RKTCT++AL
Sbjct: 182 MGVPYCIVKGKARLGRLVRRKTCTTLAL 209
>AY122076-1|AAM52588.1| 921|Drosophila melanogaster AT18175p
protein.
Length = 921
Score = 31.5 bits (68), Expect = 0.30
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 82 SVLSHAPSPSPAWRYARSTCYRGRH 156
+ L +AP S WRY R +RGRH
Sbjct: 327 ATLGNAPQVSSTWRYGRPGTHRGRH 351
>AE014297-3108|AAF55959.3| 1364|Drosophila melanogaster CG5732-PA
protein.
Length = 1364
Score = 31.5 bits (68), Expect = 0.30
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 82 SVLSHAPSPSPAWRYARSTCYRGRH 156
+ L +AP S WRY R +RGRH
Sbjct: 327 ATLGNAPQVSSTWRYGRPGTHRGRH 351
>AY118621-1|AAM49990.1| 1168|Drosophila melanogaster RE03558p
protein.
Length = 1168
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 193 NERYEELRRHWGGGVLGNKSNARIAKLEKAKARE 92
NER+E H GGGV+ K ++ K E+ +E
Sbjct: 671 NERFE----HLGGGVIAKKPQEKLEKKEQPSKKE 700
>AE014296-813|AAF47875.2| 1168|Drosophila melanogaster CG1273-PB
protein.
Length = 1168
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 193 NERYEELRRHWGGGVLGNKSNARIAKLEKAKARE 92
NER+E H GGGV+ K ++ K E+ +E
Sbjct: 671 NERFE----HLGGGVIAKKPQEKLEKKEQPSKKE 700
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,958,401
Number of Sequences: 53049
Number of extensions: 260551
Number of successful extensions: 748
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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