Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_N15
(326 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0160 + 1116160-1116678 74 2e-14
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 71 2e-13
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 66 5e-12
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 66 6e-12
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 66 8e-12
09_06_0359 + 22508900-22509439 65 1e-11
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 63 4e-11
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 62 1e-10
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 61 2e-10
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 60 5e-10
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 58 1e-09
10_01_0309 + 3417602-3418147 58 2e-09
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 57 4e-09
02_01_0086 + 613113-613532 53 6e-08
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 38 0.002
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 36 0.006
10_01_0310 + 3425099-3425218 36 0.008
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 35 0.013
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 35 0.017
01_01_0077 - 585670-585787,585921-586687 34 0.023
06_01_0214 + 1634171-1634173,1634263-1634742 32 0.093
08_02_0053 + 11721658-11721689,11721960-11722710 31 0.16
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 31 0.21
01_06_1453 - 37465665-37466627 31 0.28
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 28 1.5
03_06_0004 + 30936670-30936726,30936858-30936905,30937045-309370... 28 2.0
04_01_0437 + 5704279-5704788,5705133-5705207 27 3.5
12_01_0504 + 3999157-4000470 27 4.6
06_01_0817 - 6185881-6187074 27 4.6
03_05_0359 - 23442455-23442778 27 4.6
06_03_1248 + 28685911-28687719 26 6.1
04_01_0041 - 464695-464850,467485-469029 26 6.1
02_05_0183 + 26537676-26537752,26538481-26538649,26538736-265389... 26 6.1
02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112 26 6.1
02_02_0652 - 12651163-12653210,12653327-12653627 26 6.1
02_01_0610 + 4564016-4564018,4564166-4564243,4564764-4564788,456... 26 6.1
03_05_0451 - 24456923-24457069,24457161-24457310,24457408-244575... 26 8.0
>02_01_0160 + 1116160-1116678
Length = 172
Score = 74.1 bits (174), Expect = 2e-14
Identities = 39/71 (54%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Frame = +3
Query: 78 MSLPRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG-------YKGSTF 236
MS RVFFD+T G+P GRIV+EL P+T ENFRALCTGEKG G YKGSTF
Sbjct: 1 MSNTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTF 60
Query: 237 RPCHPQLHAAG 269
P+ G
Sbjct: 61 HRVIPEFMCQG 71
Score = 51.2 bits (117), Expect = 2e-07
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
RVIP FM QGGD T NGTGG+SIYGEK
Sbjct: 62 RVIPEFMCQGGDFTRGNGTGGESIYGEK 89
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 71.3 bits (167), Expect = 2e-13
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTF 236
+ FFDV G P GRIV+ L +V PKT +NFRALCTG+KG+GYKG +F
Sbjct: 67 KCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSF 115
Score = 48.8 bits (111), Expect = 1e-06
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGE 321
R+I +FM+QGGD N+NGTGG+SIYGE
Sbjct: 117 RIIKDFMIQGGDFQNNNGTGGRSIYGE 143
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 66.5 bits (155), Expect = 5e-12
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Frame = +3
Query: 90 RVFFDVTAD---GSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTF 236
+V+FD++ G +GR+V+ L D P+T ENFRALCTGEKGFGYKGS+F
Sbjct: 84 KVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSF 135
Score = 44.8 bits (101), Expect = 2e-05
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYG 318
RVI +FM+QGGD NGTGGKSIYG
Sbjct: 137 RVIKDFMIQGGDFDKGNGTGGKSIYG 162
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 66.1 bits (154), Expect = 6e-12
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGST 233
RV+ DV DG +GRIV+ L DV PKT NFRALCTGE+G G+KG +
Sbjct: 39 RVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKS 86
Score = 31.1 bits (67), Expect = 0.21
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTG 300
R+IP FM+QGGD+ +G G
Sbjct: 96 RIIPGFMIQGGDIVRGDGKG 115
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 65.7 bits (153), Expect = 8e-12
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKG 227
+VFFD+T +G P GRIV+ L + PKT ENFRA+CTGEKG G G
Sbjct: 41 KVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSG 86
Score = 41.5 bits (93), Expect = 2e-04
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYG 318
R+IP FM+QGGD + NGTG SIYG
Sbjct: 98 RIIPGFMIQGGDTVSGNGTGCDSIYG 123
>09_06_0359 + 22508900-22509439
Length = 179
Score = 65.3 bits (152), Expect = 1e-11
Identities = 33/68 (48%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Frame = +3
Query: 87 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG-------YKGSTFRPC 245
P+VFFD+ + GR+V+EL D PKT ENFR LCTGEKG G YKGS F
Sbjct: 6 PKVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRI 65
Query: 246 HPQLHAAG 269
P G
Sbjct: 66 IPNFMCQG 73
Score = 50.8 bits (116), Expect = 2e-07
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
R+IPNFM QGGD T NGTGG+SIYG++
Sbjct: 64 RIIPNFMCQGGDFTRGNGTGGESIYGDR 91
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 63.3 bits (147), Expect = 4e-11
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKG 227
+V+FDV DG P GR+V+ L PKT ENFRALCTGEKG G G
Sbjct: 52 KVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSG 97
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
R+IP+FM+QGGD T +G GG+SIYG K
Sbjct: 109 RIIPSFMIQGGDFTLGDGRGGESIYGTK 136
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 62.1 bits (144), Expect = 1e-10
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = +3
Query: 87 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG 218
PR F DV+ G GRIV+EL V P+T ENFRALCTGEKG G
Sbjct: 26 PRCFMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVG 69
Score = 43.6 bits (98), Expect = 4e-05
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
RVI FM+QGGD+T +GTGG+SIYG K
Sbjct: 124 RVIKGFMVQGGDITAGDGTGGESIYGLK 151
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 61.3 bits (142), Expect = 2e-10
Identities = 30/54 (55%), Positives = 34/54 (62%)
Frame = +3
Query: 87 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFRPCH 248
P VFFD+ G RI EL DV PKT ENFRALCTGE+G G ST +P +
Sbjct: 8 PHVFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGV--STQKPLY 59
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 59.7 bits (138), Expect = 5e-10
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +3
Query: 87 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKG 212
PR + DV+ G GRIVVEL V P+T ENFRALCTGEKG
Sbjct: 33 PRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKG 74
Score = 44.0 bits (99), Expect = 3e-05
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +1
Query: 220 TKAPLSDRVIPNFMLQGGDLTNHNGTGGKSIYG 318
TK R++ FM+QGGD+T +GTGG+SIYG
Sbjct: 99 TKGSCIHRIVKGFMVQGGDITAGDGTGGESIYG 131
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 58.4 bits (135), Expect = 1e-09
Identities = 31/55 (56%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Frame = +3
Query: 87 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGE---KGF--GYKGSTF 236
P VFFDVT P GRI +EL D+ PKT ENFR CTGE G GYKG F
Sbjct: 37 PVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGCQF 91
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
RVI +FM+QGGD +GTG SIYG K
Sbjct: 93 RVIKDFMIQGGDYMKGDGTGCTSIYGTK 120
>10_01_0309 + 3417602-3418147
Length = 181
Score = 57.6 bits (133), Expect = 2e-09
Identities = 31/70 (44%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Frame = +3
Query: 81 SLPRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKG-------FGYKGSTFR 239
S PRVF D+ G +GR+V+EL D P T ENFR LCTGE+ YKGS F
Sbjct: 9 SNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFH 68
Query: 240 PCHPQLHAAG 269
P G
Sbjct: 69 RVVPGFMCQG 78
Score = 39.9 bits (89), Expect = 5e-04
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKS 309
RV+P FM QGGD+T NGTGG+S
Sbjct: 69 RVVPGFMCQGGDITAGNGTGGES 91
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 56.8 bits (131), Expect = 4e-09
Identities = 32/62 (51%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +3
Query: 75 KMSLPRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG--------YKGS 230
K P VF DV+ P R+V EL DV P+T ENFRALCTGE G G YKGS
Sbjct: 3 KKKNPIVFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGS 62
Query: 231 TF 236
F
Sbjct: 63 LF 64
Score = 43.6 bits (98), Expect = 4e-05
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +1
Query: 169 RPVKTSELSV--LARRASATKAPLSDRVIPNFMLQGGDLTNHNGTGGKSIYG 318
R + T E+ + +++ K L RVI FM QGGD +N +G+GG+SIYG
Sbjct: 40 RALCTGEMGIGQTSKKPLYYKGSLFHRVIKGFMAQGGDFSNGDGSGGESIYG 91
>02_01_0086 + 613113-613532
Length = 139
Score = 52.8 bits (121), Expect = 6e-08
Identities = 27/62 (43%), Positives = 37/62 (59%)
Frame = +3
Query: 141 VELRTDVTPKTCENFRALCTGEKGFGYKGSTFRPCHPQLHAAGW*LDKPQWYRWKVHLRR 320
+EL D+ P T ENFRAL T +K YKG +P++H G L + W+R +VHLRR
Sbjct: 1 MELYADLVPLTAENFRALYT-KKPLHYKGLCLSQHYPRIHVEGRRLRQGPWHRRRVHLRR 59
Query: 321 EV 326
+
Sbjct: 60 HL 61
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1
Query: 232 LSDRVIPNFMLQGGDLTNHNGTGGKSIYG 318
L RVI +F++QGGD T +GTGG+SIYG
Sbjct: 53 LFHRVIKSFLVQGGDPTG-SGTGGESIYG 80
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +3
Query: 126 LGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFR 239
+G I V+L TD+ P T +NF LC G +G G FR
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLCKGNEGLVAGGLAFR 46
>10_01_0310 + 3425099-3425218
Length = 39
Score = 35.9 bits (79), Expect = 0.008
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 120 SPLGRIVVELRTDVTPKTCENFRALCTG 203
S G +V+E D PKT ENFR +CTG
Sbjct: 5 SRAGSVVIEQFADKVPKTTENFRPMCTG 32
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 35.1 bits (77), Expect = 0.013
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
R+I +F++QGGD T G GG+SIYG K
Sbjct: 53 RIIKDFIVQGGDPTG-TGRGGESIYGAK 79
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 34.7 bits (76), Expect = 0.017
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 129 GRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTF 236
G + +EL D+TP+TCENF C E G+ Y G F
Sbjct: 354 GDLNLELHCDITPRTCENFLTHC--ENGY-YNGLIF 386
Score = 34.7 bits (76), Expect = 0.017
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGE 321
R I NFM+QGGD T G+GG+SI+G+
Sbjct: 388 RSIKNFMIQGGDPTG-TGSGGESIWGK 413
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 34.3 bits (75), Expect = 0.023
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTF 236
+ F DV+ G P GRI + L D P F +L T G GY+ F
Sbjct: 76 KAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVT---GVGYRRKEF 121
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 32.3 bits (70), Expect = 0.093
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
R I FM+QGGD T G GG SI+G+K
Sbjct: 44 RNIKGFMIQGGDPTG-TGKGGTSIWGKK 70
Score = 29.9 bits (64), Expect = 0.49
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 126 LGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTF 236
LG I E+ D P+T ENF ALC G+ Y G+ F
Sbjct: 9 LGDIKCEVFCDQAPRTAENFLALCA--SGY-YDGTIF 42
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 31.5 bits (68), Expect = 0.16
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 114 DGSPLGRIVVELRTDVTPKTCENFRALCT 200
D PLGR++ L + P T NF+A CT
Sbjct: 123 DSEPLGRVIFGLYGRLLPLTTANFKAACT 151
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 31.1 bits (67), Expect = 0.21
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
RVI FM+Q GD +GTGG+SI+G +
Sbjct: 539 RVIKGFMIQTGDPLG-DGTGGQSIWGRE 565
>01_06_1453 - 37465665-37466627
Length = 320
Score = 30.7 bits (66), Expect = 0.28
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -1
Query: 284 FVKSPPCSMKLGMTRSESGAFVAEALLASTESSEVFTGLRSDVSSQLYNN 135
F+ PP LG ESG V EA + SS++ G+ + S+Q N
Sbjct: 150 FLNHPPTDAGLGAVTPESGGHVDEAFDTFSASSDLSPGILAAASAQFDPN 199
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 126 LGRIVVELRTDVTPKTCENFRALC 197
+G I V+L TD+ P T +NF LC
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLC 32
>03_06_0004 +
30936670-30936726,30936858-30936905,30937045-30937080,
30937184-30937258,30937568-30937692,30937770-30937779,
30938125-30938296,30938547-30938665,30938868-30938978,
30939053-30939197,30939340-30939472,30939545-30939620,
30940141-30940206,30940308-30940415,30940750-30940857,
30940948-30941145,30941343-30941591
Length = 611
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +3
Query: 51 FLVVC*YTKMSLPRVFFDVTADGSPLGRIVVE---LRTDVTPKTCENFRALCTGEKGFGY 221
++V+ T +L FFDVT G L R+ + ++ T E R + T G G+
Sbjct: 106 YIVIIVVTGTNLEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGF 165
Query: 222 KGST 233
+T
Sbjct: 166 MFAT 169
>04_01_0437 + 5704279-5704788,5705133-5705207
Length = 194
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 72 TKMSLPRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG 218
T +L R + D A +PL V+E+ D + +G +GFG
Sbjct: 45 TSTALVRFYLDRVARLNPLLHAVIEVNPDALAQAARADAERASGRRGFG 93
>12_01_0504 + 3999157-4000470
Length = 437
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 135 IVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFRP 242
I V++R + +C+N+ GEKG+ YKG F P
Sbjct: 397 ITVDMRAK-SVVSCKNYP---NGEKGYEYKGLLFNP 428
>06_01_0817 - 6185881-6187074
Length = 397
Score = 26.6 bits (56), Expect = 4.6
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = -2
Query: 298 RYHCGLSSHH----PAA*SWG*HGRKVEPL*PKPFSPVQRARKFSQVLGVTSVLSSTTIL 131
R+H + H AA S HGRK+ P P SPV A + +++ ++ST L
Sbjct: 109 RFHASVHGRHFLGFVAALSASVHGRKLSDPLPSPPSPVVSA-LLELISALSAFVASTPPL 167
Query: 130 PN 125
P+
Sbjct: 168 PH 169
>03_05_0359 - 23442455-23442778
Length = 107
Score = 26.6 bits (56), Expect = 4.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 157 SVLSSTTILPNGDPSAVTSKKTRGKDILV 71
++ +STT LP+G+ +A T GK + V
Sbjct: 70 AIATSTTALPSGNNAAAPRPTTAGKSVAV 98
>06_03_1248 + 28685911-28687719
Length = 602
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 169 RPVKTSELSVLARRASATKAPLSDRVIPNFM 261
RP + S RR+S T A SD+ +P+F+
Sbjct: 21 RPPSSPRSSDTTRRSSFTAASSSDKPVPSFL 51
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -3
Query: 294 TIVVCQVTTLQHEVGDDTVGKWSLCSRSPSRQYRELGS 181
TI+ CQ++T + G DT+ S+C + ++G+
Sbjct: 369 TIIACQISTEVKKGGSDTLDLSSVCKYKNAHDSIQVGT 406
>02_05_0183 +
26537676-26537752,26538481-26538649,26538736-26538910,
26539008-26539137,26540425-26540558,26540629-26540771,
26540894-26541092,26541183-26541514
Length = 452
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 144 ELRTDVTPKTCENFRALCTGEKGFGYKGSTFRPCHPQLHAAG 269
+L T K + ALCT KG G K CH H AG
Sbjct: 162 DLYNGTTKKLSLSRNALCTKCKGKGSKSGAAATCH-GCHGAG 202
>02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112
Length = 747
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -3
Query: 294 TIVVCQVTTLQHEVGDDTVGKWSLCSRSPSRQYRELGS 181
TI+ CQ++T + G DT+ S+C + ++G+
Sbjct: 605 TIIACQISTEVKKGGSDTLDLSSVCKYKNAHDSIQVGT 642
>02_02_0652 - 12651163-12653210,12653327-12653627
Length = 782
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -3
Query: 294 TIVVCQVTTLQHEVGDDTVGKWSLCSRSPSRQYRELGS 181
TI+ CQ++T + G DT+ S+C + ++G+
Sbjct: 621 TIIACQISTEVKKGGSDTLDLSSVCKYKNAHDSIQVGT 658
>02_01_0610 +
4564016-4564018,4564166-4564243,4564764-4564788,
4564870-4564902,4565034-4565155,4565230-4565360,
4565509-4565732,4565824-4566065,4566268-4566357
Length = 315
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 207 KGFGYKGSTFRPCHPQLHAAGW*LDKPQ 290
+G+GY+GSTF + + + A + +DKPQ
Sbjct: 4 EGYGYRGSTFEQTY-RCYPASF-IDKPQ 29
>03_05_0451 -
24456923-24457069,24457161-24457310,24457408-24457513,
24457715-24458040,24458129-24458263,24458350-24458430,
24458516-24458704,24458794-24458986,24459068-24459174,
24459280-24459354,24459446-24459601,24459745-24459828,
24459933-24460046,24460119-24460214,24460302-24460392,
24460500-24460615,24460878-24461037,24461964-24462217
Length = 859
Score = 25.8 bits (54), Expect = 8.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 179 KLPSSLYWREGLRLQRLHFPTV-SSPTSCCRVVT 277
K S L + G Q+LH P+V ++ TSC VVT
Sbjct: 120 KQVSRLVYENGYMRQQLHNPSVATTDTSCESVVT 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,656,548
Number of Sequences: 37544
Number of extensions: 192568
Number of successful extensions: 552
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 435246480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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