Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_N15
(326 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin pro... 80 4e-16
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 80 4e-16
AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical ... 79 6e-16
U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical pr... 75 1e-14
U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1 p... 69 6e-13
AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical ... 69 6e-13
Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical pr... 68 2e-12
U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin iso... 67 2e-12
AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical ... 67 2e-12
U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin iso... 65 1e-11
Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical pr... 62 7e-11
U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin iso... 62 7e-11
Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical pr... 56 5e-09
Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical p... 56 5e-09
U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin iso... 56 5e-09
U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin iso... 56 5e-09
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 54 2e-08
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 54 2e-08
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 54 2e-08
U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin pro... 49 7e-07
U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin pro... 49 7e-07
Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical pr... 49 9e-07
U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin iso... 49 9e-07
AC006720-2|AAF60445.3| 262|Caenorhabditis elegans Hypothetical ... 42 8e-05
U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin pro... 39 0.001
AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical... 38 0.001
AF393636-1|AAM19304.1| 222|Caenorhabditis elegans cyclophilin-1... 38 0.001
U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin iso... 34 0.028
U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin pro... 34 0.028
U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin pro... 34 0.028
AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical ... 33 0.037
Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical pr... 33 0.064
Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical pr... 33 0.064
U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin iso... 33 0.064
AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin M... 33 0.064
Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr... 31 0.15
Z32840-5|CAD88215.1| 509|Caenorhabditis elegans Hypothetical pr... 29 0.60
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 26 7.4
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 26 7.4
U40160-1|AAA81155.3| 531|Caenorhabditis elegans Hypothetical pr... 26 7.4
U39995-3|AAF99995.2| 572|Caenorhabditis elegans Hypothetical pr... 26 7.4
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 26 7.4
Z69634-4|CAA93455.2| 674|Caenorhabditis elegans Hypothetical pr... 25 9.7
>U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin
protein.
Length = 171
Score = 79.8 bits (188), Expect = 4e-16
Identities = 37/57 (64%), Positives = 41/57 (71%)
Frame = +3
Query: 78 MSLPRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFRPCH 248
MS PRVFFD+T G P GRIV+EL D+ PKT ENFRALCTGEKG G G +P H
Sbjct: 1 MSRPRVFFDITTAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSG---KPLH 54
Score = 52.0 bits (119), Expect = 1e-07
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
R+IP FM+QGGD T NGTGG+SIYGEK
Sbjct: 62 RIIPEFMIQGGDFTRGNGTGGESIYGEK 89
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 79.8 bits (188), Expect = 4e-16
Identities = 37/62 (59%), Positives = 43/62 (69%)
Frame = +3
Query: 84 LPRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFRPCHPQLHA 263
LPRV+ V +GRIV+ELRTDVTPKT ENFR LCTGE+GFGY+GS F P+
Sbjct: 138 LPRVYLGVKIGIRYIGRIVIELRTDVTPKTAENFRCLCTGERGFGYEGSIFHRIIPKFML 197
Query: 264 AG 269
G
Sbjct: 198 QG 199
Score = 50.0 bits (114), Expect = 4e-07
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
R+IP FMLQGGD T +GTGGKSIYG K
Sbjct: 190 RIIPKFMLQGGDFTKGDGTGGKSIYGTK 217
>AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical
protein Y75B12B.2 protein.
Length = 171
Score = 79.4 bits (187), Expect = 6e-16
Identities = 37/57 (64%), Positives = 41/57 (71%)
Frame = +3
Query: 78 MSLPRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFRPCH 248
MS PRVFFD+T G P GRIV+EL D+ PKT ENFRALCTGEKG G G +P H
Sbjct: 1 MSRPRVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSG---KPLH 54
Score = 52.0 bits (119), Expect = 1e-07
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
R+IP FM+QGGD T NGTGG+SIYGEK
Sbjct: 62 RIIPEFMIQGGDFTRGNGTGGESIYGEK 89
>U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical
protein T22F3.12 protein.
Length = 174
Score = 74.9 bits (176), Expect = 1e-14
Identities = 31/49 (63%), Positives = 37/49 (75%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTF 236
+VF D+TADG+PLG++V EL T+ PKTCENF LCTG GFGYK F
Sbjct: 4 KVFMDITADGAPLGKLVFELNTEKCPKTCENFVKLCTGPPGFGYKNCVF 52
>U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1
protein.
Length = 192
Score = 69.3 bits (162), Expect = 6e-13
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +3
Query: 87 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKG 227
P+VFFDV+ P GR+ +EL DV PKT ENFRALCTGEKG G +G
Sbjct: 22 PKVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQG 68
Score = 54.0 bits (124), Expect = 2e-08
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
R+IP FM+QGGD T HNGTGG+SIYG K
Sbjct: 80 RIIPEFMIQGGDFTRHNGTGGESIYGNK 107
>AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical
protein Y49A3A.5 protein.
Length = 192
Score = 69.3 bits (162), Expect = 6e-13
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +3
Query: 87 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKG 227
P+VFFDV+ P GR+ +EL DV PKT ENFRALCTGEKG G +G
Sbjct: 22 PKVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQG 68
Score = 54.0 bits (124), Expect = 2e-08
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
R+IP FM+QGGD T HNGTGG+SIYG K
Sbjct: 80 RIIPEFMIQGGDFTRHNGTGGESIYGNK 107
>Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical
protein ZK520.5 protein.
Length = 172
Score = 67.7 bits (158), Expect = 2e-12
Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG-------YKGSTFRPCH 248
+VFFD+T G GRIV+EL D+ PKT ENFRALCTGEKG G +KGS F
Sbjct: 5 KVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRII 64
Query: 249 PQLHAAG 269
P+ G
Sbjct: 65 PEFMIQG 71
Score = 50.0 bits (114), Expect = 4e-07
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
R+IP FM+QGGD T NGTGG+SI+GEK
Sbjct: 62 RIIPEFMIQGGDFTEGNGTGGESIHGEK 89
>U31077-1|AAC47129.1| 173|Caenorhabditis elegans cyclophilin
isoform 3 protein.
Length = 173
Score = 67.3 bits (157), Expect = 2e-12
Identities = 33/57 (57%), Positives = 37/57 (64%)
Frame = +3
Query: 78 MSLPRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFRPCH 248
MS +VFFD+T G GRIV+EL DV PKT NFRALCTGE G G G +P H
Sbjct: 1 MSRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSG---KPLH 54
Score = 54.4 bits (125), Expect = 2e-08
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
R+IPNFM+QGGD T NGTGG+SIYGEK
Sbjct: 62 RIIPNFMIQGGDFTRGNGTGGESIYGEK 89
>AL032663-4|CAA21762.1| 173|Caenorhabditis elegans Hypothetical
protein Y75B12B.5 protein.
Length = 173
Score = 67.3 bits (157), Expect = 2e-12
Identities = 33/57 (57%), Positives = 37/57 (64%)
Frame = +3
Query: 78 MSLPRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFRPCH 248
MS +VFFD+T G GRIV+EL DV PKT NFRALCTGE G G G +P H
Sbjct: 1 MSRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSG---KPLH 54
Score = 54.4 bits (125), Expect = 2e-08
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
R+IPNFM+QGGD T NGTGG+SIYGEK
Sbjct: 62 RIIPNFMIQGGDFTRGNGTGGESIYGEK 89
>U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin
isoform 2 (cyp-2) protein.
Length = 171
Score = 65.3 bits (152), Expect = 1e-11
Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG-------YKGSTFRPCH 248
+VF D+T G GRIV+EL D+ PKT ENFRALCTGEKG G +KGS F
Sbjct: 5 KVFIDITIGGKKGGRIVMELYNDIAPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRII 64
Query: 249 PQLHAAG 269
P+ G
Sbjct: 65 PEFMIQG 71
Score = 43.2 bits (97), Expect = 5e-05
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
R+IP FM+QGGD T NGT G+SI+GEK
Sbjct: 62 RIIPEFMIQGGDFTEGNGT-GESIHGEK 88
>Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical
protein T01B7.4 protein.
Length = 183
Score = 62.5 bits (145), Expect = 7e-11
Identities = 32/55 (58%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Frame = +3
Query: 87 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGE---KGF--GYKGSTF 236
P VF +VTA G+P+G IV+EL DVTP+T ENFR CTGE G GYK TF
Sbjct: 17 PIVFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTF 71
Score = 40.7 bits (91), Expect = 2e-04
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
RVI +FM+QGGD N +GTG SIYG K
Sbjct: 73 RVIKDFMIQGGDFCNGDGTGLMSIYGSK 100
>U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin
isoform 11 (CYP-11) protein.
Length = 183
Score = 62.5 bits (145), Expect = 7e-11
Identities = 32/55 (58%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Frame = +3
Query: 87 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGE---KGF--GYKGSTF 236
P VF +VTA G+P+G IV+EL DVTP+T ENFR CTGE G GYK TF
Sbjct: 17 PIVFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTF 71
Score = 40.7 bits (91), Expect = 2e-04
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
RVI +FM+QGGD N +GTG SIYG K
Sbjct: 73 RVIKDFMIQGGDFCNGDGTGLMSIYGSK 100
>Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 56.4 bits (130), Expect = 5e-09
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKG 212
RVF D++ D + +GRI + L + PKTCENFRALCTGE G
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVG 46
Score = 39.1 bits (87), Expect = 7e-04
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYG 318
R++ FM+QGGD+T +G GG SIYG
Sbjct: 64 RIVKKFMIQGGDITEGDGRGGFSIYG 89
>Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 56.4 bits (130), Expect = 5e-09
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKG 212
RVF D++ D + +GRI + L + PKTCENFRALCTGE G
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVG 46
Score = 39.1 bits (87), Expect = 7e-04
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYG 318
R++ FM+QGGD+T +G GG SIYG
Sbjct: 64 RIVKKFMIQGGDITEGDGRGGFSIYG 89
>U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 56.4 bits (130), Expect = 5e-09
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKG 212
RVF D++ D + +GRI + L + PKTCENFRALCTGE G
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVG 46
Score = 39.1 bits (87), Expect = 7e-04
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYG 318
R++ FM+QGGD+T +G GG SIYG
Sbjct: 64 RIVKKFMIQGGDITEGDGRGGFSIYG 89
>U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 56.4 bits (130), Expect = 5e-09
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKG 212
RVF D++ D + +GRI + L + PKTCENFRALCTGE G
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVG 46
Score = 39.1 bits (87), Expect = 7e-04
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYG 318
R++ FM+QGGD+T +G GG SIYG
Sbjct: 64 RIVKKFMIQGGDITEGDGRGGFSIYG 89
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 54.0 bits (124), Expect = 2e-08
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKG------FGYKGSTF 236
R FFD++ +G P GRIV L P+T ENFRA CTGE G Y+GS F
Sbjct: 10 RAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQGSVF 64
Score = 47.6 bits (108), Expect = 2e-06
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 181 TSELSVLARRASATKAPLSDRVIPNFMLQGGDLTNHNGTGGKSIYG 318
T EL + ++ + + RVI FM+QGGD+T+ NGTGG SIYG
Sbjct: 46 TGELGKMNGHYASYQGSVFHRVIKGFMIQGGDITHGNGTGGYSIYG 91
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 54.0 bits (124), Expect = 2e-08
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKG------FGYKGSTF 236
R FFD++ +G P GRIV L P+T ENFRA CTGE G Y+GS F
Sbjct: 10 RAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQGSVF 64
Score = 47.6 bits (108), Expect = 2e-06
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 181 TSELSVLARRASATKAPLSDRVIPNFMLQGGDLTNHNGTGGKSIYG 318
T EL + ++ + + RVI FM+QGGD+T+ NGTGG SIYG
Sbjct: 46 TGELGKMNGHYASYQGSVFHRVIKGFMIQGGDITHGNGTGGYSIYG 91
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 54.0 bits (124), Expect = 2e-08
Identities = 27/55 (49%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKG------FGYKGSTF 236
R FFD++ +G P GRIV L P+T ENFRA CTGE G Y+GS F
Sbjct: 10 RAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELGKMNGHYASYQGSVF 64
Score = 47.6 bits (108), Expect = 2e-06
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +1
Query: 181 TSELSVLARRASATKAPLSDRVIPNFMLQGGDLTNHNGTGGKSIYG 318
T EL + ++ + + RVI FM+QGGD+T+ NGTGG SIYG
Sbjct: 46 TGELGKMNGHYASYQGSVFHRVIKGFMIQGGDITHGNGTGGYSIYG 91
>U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin
protein.
Length = 201
Score = 49.2 bits (112), Expect = 7e-07
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTF 236
+VFFD+ G P+G+IV+ L +V PKT +NF L +G GY GS F
Sbjct: 27 KVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFVELAQRAEGEGYVGSKF 75
Score = 48.8 bits (111), Expect = 9e-07
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
RVI NFM+QGGD T +GTGG+SIYGE+
Sbjct: 77 RVIENFMIQGGDFTRGDGTGGRSIYGER 104
>U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin
protein 6 protein.
Length = 201
Score = 49.2 bits (112), Expect = 7e-07
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTF 236
+VFFD+ G P+G+IV+ L +V PKT +NF L +G GY GS F
Sbjct: 27 KVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFVELAQRAEGEGYVGSKF 75
Score = 48.8 bits (111), Expect = 9e-07
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
RVI NFM+QGGD T +GTGG+SIYGE+
Sbjct: 77 RVIENFMIQGGDFTRGDGTGGRSIYGER 104
>Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical
protein F31C3.1 protein.
Length = 204
Score = 48.8 bits (111), Expect = 9e-07
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTF 236
+V+FD+ G P+GRIV+ L PKT NF L KG GY GS F
Sbjct: 30 KVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEGYPGSKF 78
Score = 48.0 bits (109), Expect = 2e-06
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
RVI +FM+QGGD T +GTGG+SIYGEK
Sbjct: 80 RVIADFMIQGGDFTRGDGTGGRSIYGEK 107
>U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin
isoform 5 protein.
Length = 204
Score = 48.8 bits (111), Expect = 9e-07
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = +3
Query: 90 RVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTF 236
+V+FD+ G P+GRIV+ L PKT NF L KG GY GS F
Sbjct: 30 KVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEGYPGSKF 78
Score = 48.0 bits (109), Expect = 2e-06
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
RVI +FM+QGGD T +GTGG+SIYGEK
Sbjct: 80 RVIADFMIQGGDFTRGDGTGGRSIYGEK 107
>AC006720-2|AAF60445.3| 262|Caenorhabditis elegans Hypothetical
protein Y17G9B.4 protein.
Length = 262
Score = 42.3 bits (95), Expect = 8e-05
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 93 VFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEK 209
VF V+ G G IV++L D+ P+T +NF + CTGEK
Sbjct: 99 VFIHVSIGGIEEGCIVIQLFNDIVPRTAQNFESWCTGEK 137
>U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin
protein 12 protein.
Length = 169
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 172 PVKTSELSVLARRASATKAPLSDRVIPNFMLQGGDLTNHNGTGGKSIYGEK 324
P S LA+R + + R+I +FM+QGGD T G GG SIYG+K
Sbjct: 31 PRTCQNFSQLAKR-NYYNGTIFHRIIADFMIQGGDPTG-TGRGGASIYGDK 79
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 87 PRVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTF 236
P V D T +G+I +EL + P+TC+NF L K Y G+ F
Sbjct: 10 PYVILDTT-----MGKIALELYWNHAPRTCQNFSQLA---KRNYYNGTIF 51
>AL023828-29|CAA19454.2| 483|Caenorhabditis elegans Hypothetical
protein Y17G7B.9 protein.
Length = 483
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +1
Query: 223 KAPLSDRVIPNFMLQGGDLTNHNGTGGKSIYGE 321
K + R++ NF+LQGGD T GTGG+SIYG+
Sbjct: 50 KGTVFHRLVKNFILQGGDPT-ATGTGGESIYGK 81
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 129 GRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTF 236
G I +EL T P C NF LC YKG+ F
Sbjct: 22 GDIEIELWTKEAPLACRNFIQLCMENY---YKGTVF 54
>AF393636-1|AAM19304.1| 222|Caenorhabditis elegans cyclophilin-16
protein.
Length = 222
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +1
Query: 223 KAPLSDRVIPNFMLQGGDLTNHNGTGGKSIYGE 321
K + R++ NF+LQGGD T GTGG+SIYG+
Sbjct: 50 KGTVFHRLVKNFILQGGDPT-ATGTGGESIYGK 81
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 129 GRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTF 236
G I +EL T P C NF LC YKG+ F
Sbjct: 22 GDIEIELWTKEAPLACRNFIQLCMENY---YKGTVF 54
>U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin
isoform 10 protein.
Length = 147
Score = 33.9 bits (74), Expect = 0.028
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 129 GRIVVELRTDVTPKTCENFRALCTGE 206
G I +EL D PK CENF ALC +
Sbjct: 10 GDIKIELYVDDAPKACENFLALCASD 35
Score = 31.1 bits (67), Expect = 0.20
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYG 318
R I +FM+Q GD T H+G GG+SI+G
Sbjct: 44 RNIKDFMVQTGDPT-HSGKGGESIWG 68
>U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin
protein 10, isoform a protein.
Length = 147
Score = 33.9 bits (74), Expect = 0.028
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 129 GRIVVELRTDVTPKTCENFRALCTGE 206
G I +EL D PK CENF ALC +
Sbjct: 10 GDIKIELYVDDAPKACENFLALCASD 35
Score = 31.1 bits (67), Expect = 0.20
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYG 318
R I +FM+Q GD T H+G GG+SI+G
Sbjct: 44 RNIKDFMVQTGDPT-HSGKGGESIWG 68
>U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin
protein 10, isoform b protein.
Length = 161
Score = 33.9 bits (74), Expect = 0.028
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 129 GRIVVELRTDVTPKTCENFRALCTGE 206
G I +EL D PK CENF ALC +
Sbjct: 10 GDIKIELYVDDAPKACENFLALCASD 35
Score = 31.1 bits (67), Expect = 0.20
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYG 318
R I +FM+Q GD T H+G GG+SI+G
Sbjct: 44 RNIKDFMVQTGDPT-HSGKGGESIWG 68
>AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical
protein Y87G2A.6 protein.
Length = 629
Score = 33.5 bits (73), Expect = 0.037
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIYGE 321
RVI +FM+Q GD + GTGG+SI+GE
Sbjct: 517 RVIKSFMIQTGDPSG-KGTGGESIWGE 542
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +3
Query: 129 GRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTF 236
G I + L D PKT ENF CT + Y G TF
Sbjct: 483 GDITIRLFGDECPKTVENF---CTHSRRGYYNGLTF 515
>Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 32.7 bits (71), Expect = 0.064
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIY 315
R+I NFMLQGGD T G GG+SI+
Sbjct: 323 RLIKNFMLQGGDPTG-TGHGGESIW 346
>Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 32.7 bits (71), Expect = 0.064
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIY 315
R+I NFMLQGGD T G GG+SI+
Sbjct: 323 RLIKNFMLQGGDPTG-TGHGGESIW 346
>U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin
isoform 4 protein.
Length = 523
Score = 32.7 bits (71), Expect = 0.064
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIY 315
R+I NFMLQGGD T G GG+SI+
Sbjct: 323 RLIKNFMLQGGDPTG-TGHGGESIW 346
>AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin
MOG-6 protein.
Length = 523
Score = 32.7 bits (71), Expect = 0.064
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 241 RVIPNFMLQGGDLTNHNGTGGKSIY 315
R+I NFMLQGGD T G GG+SI+
Sbjct: 323 RLIKNFMLQGGDPTG-TGHGGESIW 346
>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
protein B0365.1 protein.
Length = 1099
Score = 31.5 bits (68), Expect = 0.15
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 287 WFVKSPPCSMKLGMTRSESGAFVAEALLASTESSEVFTGLRSD 159
WF K+ +K+G T F+ E A TE+ E++ + S+
Sbjct: 83 WFGKTANSYVKVGQTEGRLHTFIVEPFCAHTENEEMYIAIYSE 125
>Z32840-5|CAD88215.1| 509|Caenorhabditis elegans Hypothetical
protein C07G2.2c protein.
Length = 509
Score = 29.5 bits (63), Expect = 0.60
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 172 PVKTSELSVLARRASATKAPLSDRVIPNFMLQGGDLT 282
P ++ EL V + ASA A +S V+P M G D+T
Sbjct: 12 PPESGELDVASAVASAAAALISPMVMPTSMTNGKDMT 48
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -1
Query: 290 LWFVKSPPCSMKLGMTRSESGAFVAEALLASTESSEVFTGLRSDVSSQLYNNPSQR 123
+WF +P S KL S G+F+ +L+ E+ E + D+ YN + R
Sbjct: 1073 MWFRLTP--SQKLNYIPSMIGSFLKVSLVDDDETREATIPIFFDMMQTEYNTSASR 1126
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein
C02F4.1 protein.
Length = 1781
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -1
Query: 290 LWFVKSPPCSMKLGMTRSESGAFVAEALLASTESSEVFTGLRSDVSSQLYNNPSQR 123
+WF +P S KL S G+F+ +L+ E+ E + D+ YN + R
Sbjct: 1073 MWFRLTP--SQKLNYIPSMIGSFLKVSLVDDDETREATIPIFFDMMQTEYNTSASR 1126
>U40160-1|AAA81155.3| 531|Caenorhabditis elegans Hypothetical
protein C56E10.3 protein.
Length = 531
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 300 TGTIVVCQVTTLQHEVGDDTVGKWSLCSRSPSRQYRE 190
TGT V T + V DD G+ LCS S ++ YR+
Sbjct: 235 TGTTVTKLRTKIIKSVYDD--GEMKLCSESKAKGYRQ 269
>U39995-3|AAF99995.2| 572|Caenorhabditis elegans Hypothetical
protein M60.2 protein.
Length = 572
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 175 VKTSELSVLARRASATKAPLSDRVIPNFMLQGGDLTNHNGTG 300
++ E+ + A S KA + D+V+ +F T H G+G
Sbjct: 256 IQGEEIDIQAPTLSVNKATVLDKVVISFGSSSKATTKHAGSG 297
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -1
Query: 290 LWFVKSPPCSMKLGMTRSESGAFVAEALLASTESSEVFTGLRSDVSSQLYNNPSQR 123
+WF +P S KL S G+F+ +L+ E+ E + D+ YN + R
Sbjct: 1073 MWFRLTP--SQKLNYIPSMIGSFLKVSLVDDDETREATIPIFFDMMQTEYNTSASR 1126
>Z69634-4|CAA93455.2| 674|Caenorhabditis elegans Hypothetical
protein B0001.6 protein.
Length = 674
Score = 25.4 bits (53), Expect = 9.7
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = -1
Query: 263 SMKLGMTRSESGA---FVAEALLASTESSEVFTGLRSDVSSQLYNNPSQR*SISCYVKEN 93
S + +RSE G F+A AS + SE F L D+ L N ++ +I C K+
Sbjct: 176 SKETNFSRSEEGTWVKFLACTATASVKKSEGFQFLEKDL---LDTNRNREIAIKCSRKDG 232
Query: 92 SRQRH 78
Q H
Sbjct: 233 IIQSH 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,878,967
Number of Sequences: 27780
Number of extensions: 151599
Number of successful extensions: 462
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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