Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_N15
(326 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 1.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 1.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 1.6
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 22 2.2
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 5.0
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 5.0
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 5.0
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 5.0
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 5.0
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 5.0
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 5.0
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 5.0
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 5.0
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 5.0
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 5.0
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 5.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 5.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 20 6.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 20 6.6
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 20 8.8
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 20 8.8
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 1.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 169 LGVTSVLSSTTILPNGDPSAVTSKKTRGKDILVY 68
LGVT+VL+ TT++ +A K + K I VY
Sbjct: 255 LGVTTVLTMTTLM--SSTNAALPKISYVKSIDVY 286
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 1.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 169 LGVTSVLSSTTILPNGDPSAVTSKKTRGKDILVY 68
LGVT+VL+ TT++ +A K + K I VY
Sbjct: 255 LGVTTVLTMTTLM--SSTNAALPKISYVKSIDVY 286
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.2 bits (45), Expect = 1.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 169 LGVTSVLSSTTILPNGDPSAVTSKKTRGKDILVY 68
LGVT+VL+ TT++ +A K + K I VY
Sbjct: 194 LGVTTVLTMTTLM--SSTNAALPKISYVKSIDVY 225
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 21.8 bits (44), Expect = 2.2
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 36 YHNDDACFVASC 1
YHNDD F+ C
Sbjct: 210 YHNDDKTFLVWC 221
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 20.6 bits (41), Expect = 5.0
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2
Query: 169 LGVTSVLSSTTI 134
LG+T+VL+ TTI
Sbjct: 276 LGITTVLTMTTI 287
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 222 CSRSPSRQYRE 190
CSR +R+YRE
Sbjct: 4 CSRDRNREYRE 14
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 222 CSRSPSRQYRE 190
CSR +R+YRE
Sbjct: 4 CSRDRNREYRE 14
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 222 CSRSPSRQYRE 190
CSR +R+YRE
Sbjct: 4 CSRDRNREYRE 14
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 222 CSRSPSRQYRE 190
CSR +R+YRE
Sbjct: 4 CSRDRNREYRE 14
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 222 CSRSPSRQYRE 190
CSR +R+YRE
Sbjct: 4 CSRDRNREYRE 14
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 222 CSRSPSRQYRE 190
CSR +R+YRE
Sbjct: 4 CSRDRNREYRE 14
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 222 CSRSPSRQYRE 190
CSR +R+YRE
Sbjct: 4 CSRDRNREYRE 14
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 222 CSRSPSRQYRE 190
CSR +R+YRE
Sbjct: 4 CSRDRNREYRE 14
Score = 19.8 bits (39), Expect = 8.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 299 PVPLWFVKSPPCSM 258
PVP+++ PP SM
Sbjct: 118 PVPVYYGNFPPRSM 131
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 222 CSRSPSRQYRE 190
CSR +R+YRE
Sbjct: 4 CSRDRNREYRE 14
Score = 19.8 bits (39), Expect = 8.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 299 PVPLWFVKSPPCSM 258
PVP+++ PP SM
Sbjct: 118 PVPVYYGNFPPRSM 131
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 222 CSRSPSRQYRE 190
CSR +R+YRE
Sbjct: 4 CSRDRNREYRE 14
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 222 CSRSPSRQYRE 190
CSR +R+YRE
Sbjct: 4 CSRDRNREYRE 14
Score = 19.8 bits (39), Expect = 8.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 299 PVPLWFVKSPPCSM 258
PVP+++ PP SM
Sbjct: 118 PVPVYYGNFPPRSM 131
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 222 CSRSPSRQYRE 190
CSR +R+YRE
Sbjct: 237 CSRDRNREYRE 247
Score = 19.8 bits (39), Expect = 8.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 299 PVPLWFVKSPPCSM 258
PVP+++ PP SM
Sbjct: 351 PVPVYYGNFPPRSM 364
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 20.2 bits (40), Expect = 6.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -3
Query: 141 QQSFPTVIHQLLRQRKLAAKTF*CISKPLK 52
Q + +V HQLL+ T C LK
Sbjct: 19 QSNMTSVFHQLLQTEAFVDVTLACNEASLK 48
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.2 bits (40), Expect = 6.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 175 VKTSELSVLARRASATKAPLSDRVIPN 255
+KTS++ + S K L D +IP+
Sbjct: 171 LKTSKIVSYPKSRSRKKGGLKDNLIPD 197
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 19.8 bits (39), Expect = 8.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 182 VFTGLRSDVSSQLY 141
+FTGL+SD+ Y
Sbjct: 245 MFTGLKSDIPPVAY 258
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 19.8 bits (39), Expect = 8.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 300 TGTIVVCQVTTLQH 259
T TIV+CQ T H
Sbjct: 15 TITIVMCQTFTYSH 28
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,897
Number of Sequences: 438
Number of extensions: 1981
Number of successful extensions: 25
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7217694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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