Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_N14
(255 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 87 1e-18
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 80 3e-16
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 71 1e-13
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 62 6e-11
08_01_0397 - 3509186-3510291,3510322-3512335 60 2e-10
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 60 3e-10
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 58 1e-09
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 56 4e-09
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 43 3e-05
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 41 1e-04
06_03_1255 + 28780181-28781172,28782065-28782932 40 2e-04
02_01_0381 - 2764331-2764342,2768966-2769907 40 4e-04
03_05_0865 - 28365430-28367640 38 8e-04
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 36 0.005
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 33 0.032
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 31 0.097
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 30 0.22
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 28 0.90
07_01_1167 + 11030200-11031165,11031273-11031407,11031509-11031874 27 1.6
05_04_0123 + 18210069-18213737 27 1.6
10_01_0003 + 46158-46428,46588-46706,46819-46928,48977-49415,495... 27 2.1
07_01_1218 - 11633829-11634628,11634713-11635050,11635349-116354... 26 3.6
05_03_0100 + 8391700-8392390,8392531-8392812,8393767-8394317 26 3.6
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 26 4.8
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 26 4.8
03_01_0540 - 4055635-4055743,4055829-4055981,4056037-4056104,405... 26 4.8
11_01_0199 + 1563483-1563572,1563673-1563852,1564091-1564402,156... 25 6.4
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 25 6.4
03_01_0130 - 1007433-1007712,1007739-1007803,1007804-1008001,100... 25 6.4
04_04_0028 - 22243272-22243577,22244564-22244713,22244919-222456... 25 8.4
02_05_0893 + 32578890-32579003,32579325-32579554,32580147-32580768 25 8.4
01_07_0192 - 41888998-41890632 25 8.4
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 87.4 bits (207), Expect = 1e-18
Identities = 38/80 (47%), Positives = 53/80 (66%)
Frame = +2
Query: 14 SLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFRDYVCQAI 193
SL PF K+FY +V S +V YR + ++TV G +VP P+ +F+EANF DY QAI
Sbjct: 112 SLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAI 171
Query: 194 KSMGYKDATPIQAQGWPIAM 253
G+ + TPIQ+QGWP+A+
Sbjct: 172 AKSGFVEPTPIQSQGWPMAL 191
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 79.8 bits (188), Expect = 3e-16
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +2
Query: 17 LQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFRDYVCQAIK 196
L F K+FY SV + EVE YR + E+TV G +VP P+ F + F +YV Q I
Sbjct: 48 LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEIT 107
Query: 197 SMGYKDATPIQAQGWPIAM 253
G+ + TPIQ+QGWP+A+
Sbjct: 108 KAGFVEPTPIQSQGWPMAL 126
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 71.3 bits (167), Expect = 1e-13
Identities = 34/84 (40%), Positives = 43/84 (51%)
Frame = +2
Query: 2 HEALSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFRDYV 181
H + +PFNKDFY SV S EV DY + VSG +VP PI+ F + F +
Sbjct: 171 HSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQL 230
Query: 182 CQAIKSMGYKDATPIQAQGWPIAM 253
AI GY+ T IQ Q PI +
Sbjct: 231 MNAIAKQGYEKPTTIQCQALPIVL 254
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 62.1 bits (144), Expect = 6e-11
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = +2
Query: 86 EDYRNKHEVTVSGVEVPNPIEHFEEANFRDYVCQAIKSMGYKDATPIQAQGWPIAM 253
E YR++HE+TV G VP PI FE F + + I+ G+ TPIQAQ WPIA+
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIAL 185
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 60.1 bits (139), Expect = 2e-10
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +2
Query: 2 HEALSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFRDYV 181
H + QPF K+FY K + + EV YR + E+ V G +VP PI+ + ++ +
Sbjct: 376 HSKIDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKL 435
Query: 182 CQAIKSMGYKDATPIQAQGWPIAM 253
IK +G++ IQAQ PI M
Sbjct: 436 LDTIKKLGFEKPMSIQAQALPIIM 459
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 59.7 bits (138), Expect = 3e-10
Identities = 29/84 (34%), Positives = 43/84 (51%)
Frame = +2
Query: 2 HEALSLQPFNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFRDYV 181
H + QPF K+ Y K + + EV YR E+ V G +VP PI+ + ++ +
Sbjct: 237 HSKIEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKL 296
Query: 182 CQAIKSMGYKDATPIQAQGWPIAM 253
IK +G++ PIQAQ PI M
Sbjct: 297 LDTIKKLGFEKPMPIQAQALPIIM 320
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 58.0 bits (134), Expect = 1e-09
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +2
Query: 86 EDYRNKHEVTVSGVEVPNPIEHFEEANFRDYVCQAIKSMGYKDATPIQAQGWPIAM 253
E YR KHE+T+ G E P P F+ F + + ++ G+ TPIQAQ WPIA+
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIAL 215
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 56.0 bits (129), Expect = 4e-09
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +2
Query: 92 YRNKHEVTVSGVEVPNPIEHFEEANFRDYVCQAIKSMGYKDATPIQAQGWPIAM 253
YR HEVT G VP P FE F + Q I + G+ + TPIQAQ WP+A+
Sbjct: 586 YRQHHEVTAVGENVPPPFMTFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVAL 639
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 43.2 bits (97), Expect = 3e-05
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +2
Query: 95 RNKHEVTVSGVEVPNPIEHFEEANFR----DYVCQAIKSMGYKDATPIQAQGWPIAM 253
R K ++ +SG VP P+E+FEE R Y+ + +G+++ TPIQ Q PI +
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILL 181
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 41.1 bits (92), Expect = 1e-04
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 110 VTVSGVEVPNPIEHFEEANFRDYVCQAIKSMGYKDATPIQAQGWPIAM 253
V VSG +VP P + FE A + V + + GY+ TP+Q PIA+
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIAL 119
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 40.3 bits (90), Expect = 2e-04
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 LDRSPYEVED-YRNKHEVTVSGVEVPNPIEHFEEANFRDYVCQAIKSMGYKDATPIQAQG 238
L R P D R + V G +VP P F + + + +A++ G + TPIQ QG
Sbjct: 144 LRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQVQG 203
Query: 239 WPIAM 253
P+A+
Sbjct: 204 LPVAL 208
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 39.5 bits (88), Expect = 4e-04
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 80 EVEDYRNKHEVTVSGVEVPNPIEHFEEANFRDYVCQAIKSMGYKDATPIQAQGWPIAM 253
+ ++ R K + V G +VP P F + + + + ++ G TPIQ QG P+ +
Sbjct: 160 KADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVL 217
>03_05_0865 - 28365430-28367640
Length = 736
Score = 38.3 bits (85), Expect = 8e-04
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = +2
Query: 53 KSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEEANFRDYVCQAIKSMGYKDATPIQA 232
KS+ + + + +R ++ G +VP P+ + E+ + +A++ GYK+ +PIQ
Sbjct: 284 KSLDEMTERDWRIFREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQM 343
Query: 233 QGWPIAM 253
P+ +
Sbjct: 344 ASIPLGL 350
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 35.9 bits (79), Expect = 0.005
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +2
Query: 80 EVEDYRNKHEVTVSGVEVPNPIEHFEEANFRDYVCQAIKSMGYKDATPIQAQGWP 244
++ R+K ++ V G +VP+PI F + + + +++ GY TP+Q Q P
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIP 214
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 33.1 bits (72), Expect = 0.032
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 110 VTVSGVEVPNPIEHFEEANFRDYVCQAIKSMGYKDATPIQAQGWPIAM 253
V SG +VP P+ F E + D + + I+ Y TP+Q PI++
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISI 272
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 31.5 bits (68), Expect = 0.097
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 110 VTVSGVEVPNPIEHFEEANFRDYVCQAIKSMGYKDATPIQAQGWPIAM 253
V SG +VP P F E + D + + I+ Y TP+Q PI++
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISI 358
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 30.3 bits (65), Expect = 0.22
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 110 VTVSGVEVPNPIEHFEEANFRDYVCQAIKSMGYKDATPIQAQGWPIAM 253
V SG EVP P+ F E + + I+ Y TP+Q PI++
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISL 190
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 28.3 bits (60), Expect = 0.90
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 152 FEEANFRDYVCQAIKSMGYKDATPIQAQGWPIAM 253
F E N + +A +++GY+ TPIQA P+A+
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLAL 229
>07_01_1167 + 11030200-11031165,11031273-11031407,11031509-11031874
Length = 488
Score = 27.5 bits (58), Expect = 1.6
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 108 KSLLVELKYLIL-LNILKRQTFEIMCVKQ*KVWVTKMLRLYRLKDGQS 248
KS K+ +L ++LK TF CV+ K W++ RL RL++ S
Sbjct: 407 KSHAAFAKFFVLNASVLKVMTFRA-CVRLSKKWLSNQRRLLRLREKAS 453
>05_04_0123 + 18210069-18213737
Length = 1222
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 135 LILLNILK-RQTFEIMCVKQ*KVWVTKMLRLYRLKDGQSL 251
+ L NI+K + T I C+K VW L + RLKD + L
Sbjct: 778 ITLRNIVKLKVTDSINCMKLPSVWKLPFLEVLRLKDMKKL 817
>10_01_0003 +
46158-46428,46588-46706,46819-46928,48977-49415,
49511-49633,49805-50106,50143-50350,50729-51448
Length = 763
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 44 NPHKSVLDRS--PYEVEDYRNKHEVTVSGVEVPNPIEHFEEAN 166
N +S+LD YE + +++E+T+S PN E +AN
Sbjct: 234 NNAESILDEGYISYEAQTPADRYEITISDNGQPNDYESLVDAN 276
>07_01_1218 -
11633829-11634628,11634713-11635050,11635349-11635445,
11635482-11635725,11636114-11636122
Length = 495
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 29 NKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIE 148
NK YN +++ R+P + E Y N ++ EV P+E
Sbjct: 137 NKHKYNELGNIIPRTPTDQEKYGNNSSYILNIEEVILPLE 176
>05_03_0100 + 8391700-8392390,8392531-8392812,8393767-8394317
Length = 507
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 134 PNPIEHFEEANFRDYVCQAIKSM 202
P+ ++ F E+NF D V A K+M
Sbjct: 440 PSSLKDFNESNFNDVVSTAFKNM 462
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +2
Query: 152 FEEANFRDYVCQAIKSMGYKDATPIQAQGWPIAM 253
FE + V + ++ GY+ TPIQ + P+ +
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLIL 61
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 152 FEEANFRDYVCQAIKSMGYKDATPIQAQGWPIA 250
+ E + A++ +G+K+ TPIQ +P A
Sbjct: 144 WRELRLHPLLITAVRRLGFKEPTPIQKACFPAA 176
>03_01_0540 -
4055635-4055743,4055829-4055981,4056037-4056104,
4056486-4056580,4057180-4057241,4057371-4057410,
4058124-4059141,4059231-4059611,4059873-4059880,
4061005-4061067,4061416-4061719
Length = 766
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 98 NKHEVTVSGVEVPNPIEHFEEAN-FRDYVCQAIKS 199
+K+ SGV +PNP+ + + N +D V +A+++
Sbjct: 584 SKYLKITSGVVIPNPVGEYTKRNHLQDRVLEALRT 618
>11_01_0199 +
1563483-1563572,1563673-1563852,1564091-1564402,
1564753-1564800,1565205-1565438,1565632-1566219
Length = 483
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 38 FYNPHKSVLDRSPYEVEDYR-NKHEVTVSGVEVPNPIEHFEEANFRD 175
FY P+ ++ P E D ++ V G+++P +++ + +F D
Sbjct: 341 FYTPYIALDLTDPREKIDLEMGNKDILVGGMQIPTVLQNIDYGSFED 387
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 152 FEEANFRDYVCQAIKSMGYKDATPIQAQGWPIAM 253
F+E + + +A++ G ATPIQ + P+ +
Sbjct: 85 FDELGLDEQLKRALRKKGLDKATPIQREAIPLIL 118
>03_01_0130 -
1007433-1007712,1007739-1007803,1007804-1008001,
1008103-1008273,1008405-1008553,1008780-1008927,
1009015-1009083,1009168-1009416,1009516-1009710,
1009869-1009985,1010205-1011329
Length = 921
Score = 25.4 bits (53), Expect = 6.4
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 14 SLQPFNKD-FYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEHFEE 160
SLQ +KD +YNP+ +VLD E + + H + G + + +FEE
Sbjct: 464 SLQTLHKDDYYNPNFAVLDAQGPR-EPWHDLHS-KIDGPAAYDVLTNFEE 511
>04_04_0028 -
22243272-22243577,22244564-22244713,22244919-22245656,
22247233-22247331,22247541-22247933,22248806-22248961
Length = 613
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 12 CRSNHLTKIFIILINQSWIGHHMK*RTIETN 104
CR HL FI L SW G R +E N
Sbjct: 350 CRLQHLQFSFISLQPPSWFGGFPNLRKLELN 380
>02_05_0893 + 32578890-32579003,32579325-32579554,32580147-32580768
Length = 321
Score = 25.0 bits (52), Expect = 8.4
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 68 YPRLIYEDYKNL 33
YPR ++EDY NL
Sbjct: 279 YPRFVFEDYMNL 290
>01_07_0192 - 41888998-41890632
Length = 544
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 119 SGVEVPNP--IEHFEEANFRDYVCQAIKSMGYKD 214
SGV NP ++HF A+F +YV A ++ ++D
Sbjct: 84 SGVATANPAVVDHFLRASFPNYVKGARFAVPFED 117
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,338,300
Number of Sequences: 37544
Number of extensions: 101255
Number of successful extensions: 270
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 14,793,348
effective HSP length: 63
effective length of database: 12,428,076
effective search space used: 260989596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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