Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N13
         (76 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein ...    30   0.19 
U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein ...    30   0.19 
U50301-5|AAT81199.1|  365|Caenorhabditis elegans Serpin protein ...    30   0.19 
AY525085-1|AAS13533.1|  365|Caenorhabditis elegans serine or cys...    30   0.19 
AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or cys...    30   0.19 
AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or cys...    30   0.19 

>U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform a protein.
          Length = 366

 Score = 30.3 bits (65), Expect = 0.19
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 11  FRHEETNDRIKDLLSSDSINSD 76
           F  E T D IK ++ SDSINSD
Sbjct: 132 FVRENTGDHIKKIIGSDSINSD 153


>U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform b protein.
          Length = 366

 Score = 30.3 bits (65), Expect = 0.19
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 11  FRHEETNDRIKDLLSSDSINSD 76
           F  E T D IK ++ SDSINSD
Sbjct: 132 FVRENTGDHIKKIIGSDSINSD 153


>U50301-5|AAT81199.1|  365|Caenorhabditis elegans Serpin protein 7,
           isoform c protein.
          Length = 365

 Score = 30.3 bits (65), Expect = 0.19
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 11  FRHEETNDRIKDLLSSDSINSD 76
           F  E T D IK ++ SDSINSD
Sbjct: 132 FVRENTGDHIKKIIGSDSINSD 153


>AY525085-1|AAS13533.1|  365|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 365

 Score = 30.3 bits (65), Expect = 0.19
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 11  FRHEETNDRIKDLLSSDSINSD 76
           F  E T D IK ++ SDSINSD
Sbjct: 132 FVRENTGDHIKKIIGSDSINSD 153


>AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 30.3 bits (65), Expect = 0.19
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 11  FRHEETNDRIKDLLSSDSINSD 76
           F  E T D IK ++ SDSINSD
Sbjct: 132 FVRENTGDHIKKIIGSDSINSD 153


>AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 30.3 bits (65), Expect = 0.19
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 11  FRHEETNDRIKDLLSSDSINSD 76
           F  E T D IK ++ SDSINSD
Sbjct: 132 FVRENTGDHIKKIIGSDSINSD 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,561,580
Number of Sequences: 27780
Number of extensions: 8922
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 12,740,198
effective HSP length: 6
effective length of database: 12,573,518
effective search space used: 226323324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)