Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_N12
(439 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 252 1e-67
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 252 1e-67
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 252 1e-67
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 247 6e-66
AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB... 30 1.2
AY061207-1|AAL28755.1| 707|Drosophila melanogaster LD15658p pro... 29 2.8
AE014134-3600|EAA46022.2| 714|Drosophila melanogaster CG17490-P... 29 2.8
AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p pro... 28 6.4
AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubuli... 28 6.4
AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA... 28 6.4
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 252 bits (618), Expect = 1e-67
Identities = 114/143 (79%), Positives = 127/143 (88%)
Frame = +2
Query: 11 GPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPYKLRECLPLVIFLRNRLKYALTGNEVLK 190
GPKKHLKRL APKAWMLDKLGGV+APRPSTGP+KLRE LPL+IFLRNRLKYAL G EV K
Sbjct: 4 GPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTK 63
Query: 191 IVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKANELFRLIYDVKGRFTIHRITPEEAKYKL 370
IV QRL+KVDGKVRTDPTYPAG+MDV+++EK E FRL+YDVKGRF IHRI+ EEAKYKL
Sbjct: 64 IVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKL 123
Query: 371 CKVRRVATGPKSVPYLVTHDGRT 439
CKV++ G K VP+LVTHDGRT
Sbjct: 124 CKVKKTQLGAKGVPFLVTHDGRT 146
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 252 bits (618), Expect = 1e-67
Identities = 114/143 (79%), Positives = 127/143 (88%)
Frame = +2
Query: 11 GPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPYKLRECLPLVIFLRNRLKYALTGNEVLK 190
GPKKHLKRL APKAWMLDKLGGV+APRPSTGP+KLRE LPL+IFLRNRLKYAL G EV K
Sbjct: 4 GPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTK 63
Query: 191 IVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKANELFRLIYDVKGRFTIHRITPEEAKYKL 370
IV QRL+KVDGKVRTDPTYPAG+MDV+++EK E FRL+YDVKGRF IHRI+ EEAKYKL
Sbjct: 64 IVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKL 123
Query: 371 CKVRRVATGPKSVPYLVTHDGRT 439
CKV++ G K VP+LVTHDGRT
Sbjct: 124 CKVKKTQLGAKGVPFLVTHDGRT 146
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 252 bits (618), Expect = 1e-67
Identities = 114/143 (79%), Positives = 127/143 (88%)
Frame = +2
Query: 11 GPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPYKLRECLPLVIFLRNRLKYALTGNEVLK 190
GPKKHLKRL APKAWMLDKLGGV+APRPSTGP+KLRE LPL+IFLRNRLKYAL G EV K
Sbjct: 4 GPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTK 63
Query: 191 IVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKANELFRLIYDVKGRFTIHRITPEEAKYKL 370
IV QRL+KVDGKVRTDPTYPAG+MDV+++EK E FRL+YDVKGRF IHRI+ EEAKYKL
Sbjct: 64 IVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKL 123
Query: 371 CKVRRVATGPKSVPYLVTHDGRT 439
CKV++ G K VP+LVTHDGRT
Sbjct: 124 CKVKKTQLGAKGVPFLVTHDGRT 146
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 247 bits (604), Expect = 6e-66
Identities = 112/143 (78%), Positives = 125/143 (87%)
Frame = +2
Query: 11 GPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPYKLRECLPLVIFLRNRLKYALTGNEVLK 190
GPKKHLKRL APKAWMLDKLGGV+APRPSTGP+KLRE LPL+ FLRNRLKYAL G EV K
Sbjct: 4 GPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEVTK 63
Query: 191 IVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKANELFRLIYDVKGRFTIHRITPEEAKYKL 370
IV QRL+KV GKVRTDPTYPAG+MDV+++EK E FRL+YDVKGRF IHRI+ EEAKYKL
Sbjct: 64 IVMQRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKL 123
Query: 371 CKVRRVATGPKSVPYLVTHDGRT 439
CKV++ G K VP+LVTHDGRT
Sbjct: 124 CKVKKTQLGAKGVPFLVTHDGRT 146
>AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB,
isoform B protein.
Length = 737
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 47 KAWMLDKLGGVYAPRPSTGPYKLRECLPLVIFLRNRLK---YALTGNEVLKIVKQRLIKV 217
++W L + AP P G Y E +R ++ ++TG E++++VKQ KV
Sbjct: 4 RSWNLLQYATEKAPIPLDG-YTAEEAAEFKDSIRQKIVDDLKSMTGEELIELVKQNAAKV 62
Query: 218 -DGKVRTDPTYP 250
+ KV PT P
Sbjct: 63 EEEKVEIPPTEP 74
>AY061207-1|AAL28755.1| 707|Drosophila melanogaster LD15658p
protein.
Length = 707
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/102 (22%), Positives = 43/102 (42%)
Frame = -1
Query: 376 LAQLVLGFFRCDTVDSEPSFHIIY*TE*LICFLNGYNVHKSRRVRGVSPHFPVHFDETLL 197
L + V G + C +D + + L C G + + +R +P+F L
Sbjct: 328 LTKPVSGIYACCWIDQKEELFCLSDNNTLYCISFGMSEMNDQTLRISTPNFAPSALMRLQ 387
Query: 196 HNLKHLIAGERVLEPISQEDH*RQAFAQLVGTRRGPRRVHAA 71
HN + L ++ + + Q+ + QL+ + RRV+AA
Sbjct: 388 HNAEALQEYKKHPDSLRQKLYREYKQQQLISMSKNIRRVNAA 429
>AE014134-3600|EAA46022.2| 714|Drosophila melanogaster CG17490-PB,
isoform B protein.
Length = 714
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/102 (22%), Positives = 43/102 (42%)
Frame = -1
Query: 376 LAQLVLGFFRCDTVDSEPSFHIIY*TE*LICFLNGYNVHKSRRVRGVSPHFPVHFDETLL 197
L + V G + C +D + + L C G + + +R +P+F L
Sbjct: 335 LTKPVSGIYACCWIDQKEELFCLSDNNTLYCISFGMSEMNDQTLRISTPNFAPSALMRLQ 394
Query: 196 HNLKHLIAGERVLEPISQEDH*RQAFAQLVGTRRGPRRVHAA 71
HN + L ++ + + Q+ + QL+ + RRV+AA
Sbjct: 395 HNAEALQEYKKHPDSLRQKLYREYKQQQLISMSKNIRRVNAA 436
>AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p protein.
Length = 1351
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 104 PYKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLI 211
P+ R CL L + Y L NEVL+I +++ I
Sbjct: 996 PFMARRCLQLSVMAPLNAYYGLLRNEVLRIFQEQRI 1031
>AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubulin
ring protein protein.
Length = 1351
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 104 PYKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLI 211
P+ R CL L + Y L NEVL+I +++ I
Sbjct: 996 PFMARRCLQLSVMAPLNAYYGLLRNEVLRIFQEQRI 1031
>AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA
protein.
Length = 1351
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 104 PYKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLI 211
P+ R CL L + Y L NEVL+I +++ I
Sbjct: 996 PFMARRCLQLSVMAPLNAYYGLLRNEVLRIFQEQRI 1031
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,397,051
Number of Sequences: 53049
Number of extensions: 438276
Number of successful extensions: 1194
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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