Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_N10
(396 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 167 1e-41
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 167 1e-41
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 167 1e-41
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 167 1e-41
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 167 1e-41
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 167 1e-41
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 167 1e-41
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 167 1e-41
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 167 1e-41
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 167 1e-41
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 167 1e-41
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 167 1e-41
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 167 1e-41
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 167 1e-41
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 164 1e-40
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 33 0.26
AK057255-1|BAB71398.1| 260|Homo sapiens protein ( Homo sapiens ... 29 4.2
BC034977-1|AAH34977.2| 475|Homo sapiens ubiquilin-like protein. 29 7.4
BC012183-1|AAH12183.2| 475|Homo sapiens ubiquilin-like protein. 29 7.4
AK127987-1|BAC87218.1| 630|Homo sapiens protein ( Homo sapiens ... 29 7.4
AY049721-1|AAL06645.1| 2696|Homo sapiens androgen receptor assoc... 28 9.7
AK055187-1|BAB70868.1| 1059|Homo sapiens protein ( Homo sapiens ... 28 9.7
AF395588-1|AAL40694.1| 2696|Homo sapiens putative nuclear protei... 28 9.7
AF380302-1|AAL27991.1| 2427|Homo sapiens androgen receptor-assoc... 28 9.7
AF322907-1|AAK92049.1| 2596|Homo sapiens NSD1 protein. 28 9.7
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 167 bits (406), Expect = 1e-41
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRCPTVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQT 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 167 bits (406), Expect = 1e-41
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRCPTVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQA 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 167 bits (406), Expect = 1e-41
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRCPTVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQT 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 167 bits (406), Expect = 1e-41
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRCPTVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQA 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 167 bits (406), Expect = 1e-41
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRCPTVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQA 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 167 bits (406), Expect = 1e-41
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRCPTVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQA 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 167 bits (406), Expect = 1e-41
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRCPTVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQA 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 167 bits (406), Expect = 1e-41
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRCPTVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQA 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 167 bits (406), Expect = 1e-41
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRCPTVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQA 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 167 bits (406), Expect = 1e-41
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRCPTVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQA 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 167 bits (406), Expect = 1e-41
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRCPTVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQA 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 167 bits (406), Expect = 1e-41
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRCPTVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQA 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 167 bits (406), Expect = 1e-41
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRCPTVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQA 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 167 bits (406), Expect = 1e-41
Identities = 80/118 (67%), Positives = 96/118 (81%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRCPTVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQA 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 164 bits (398), Expect = 1e-40
Identities = 79/118 (66%), Positives = 95/118 (80%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 GPLRPVVRCPTVRYHTKVRAGRGFTLREIRASGLNPSLARTIGIAVDPRRRNKSVESLQI 224
GP+RP+VRC TVRYHTKVRAGRGF+L E+R +G++ +ARTIGI+VDPRRRNKS ESLQ
Sbjct: 53 GPIRPIVRCTTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQA 112
Query: 225 NVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPIT 395
NVQRLKEYR++LILFP K KG+++ EE KLATQL GP+MPV+ K AR IT
Sbjct: 113 NVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVIT 170
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 33.5 bits (73), Expect = 0.26
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +3
Query: 318 KLATQLRGPLMPVQQTAPKSVARPIT 395
KLATQL GP+MPV+ K AR IT
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVIT 27
>AK057255-1|BAB71398.1| 260|Homo sapiens protein ( Homo sapiens
cDNA FLJ32693 fis, clone TESTI2000253, weakly similar to
Homo sapiens A1U mRNA. ).
Length = 260
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/61 (19%), Positives = 31/61 (50%)
Frame = +3
Query: 204 SVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVA 383
++ S+++ Q +EY+ + ++ LKG+ + + ++Q+ G +M + P A
Sbjct: 167 ALPSIELTQQLQEEYKGATVSLSSSRQTLKGDLQLSDEQSSSQITGGMMQLLMNNPYLAA 226
Query: 384 R 386
+
Sbjct: 227 Q 227
>BC034977-1|AAH34977.2| 475|Homo sapiens ubiquilin-like protein.
Length = 475
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/61 (19%), Positives = 31/61 (50%)
Frame = +3
Query: 204 SVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVA 383
++ S+++ Q +EY+ + ++ LKG+ + + ++Q+ G +M + P A
Sbjct: 382 ALPSIELTQQLQEEYKDATVSLSSSRQTLKGDLQLSDEQSSSQITGGMMQLLMNNPYLAA 441
Query: 384 R 386
+
Sbjct: 442 Q 442
>BC012183-1|AAH12183.2| 475|Homo sapiens ubiquilin-like protein.
Length = 475
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/61 (19%), Positives = 31/61 (50%)
Frame = +3
Query: 204 SVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVA 383
++ S+++ Q +EY+ + ++ LKG+ + + ++Q+ G +M + P A
Sbjct: 382 ALPSIELTQQLQEEYKDATVSLSSSRQTLKGDLQLSDEQSSSQITGGMMQLLMNNPYLAA 441
Query: 384 R 386
+
Sbjct: 442 Q 442
>AK127987-1|BAC87218.1| 630|Homo sapiens protein ( Homo sapiens
cDNA FLJ46103 fis, clone TESTI2023903, weakly similar
to Homo sapiens ubiquilin 1 (UBQLN1). ).
Length = 630
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/61 (19%), Positives = 31/61 (50%)
Frame = +3
Query: 204 SVESLQINVQRLKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVA 383
++ S+++ Q +EY+ + ++ LKG+ + + ++Q+ G +M + P A
Sbjct: 537 ALPSIELTQQLQEEYKDATVSLSSSRQTLKGDLQLSDEQSSSQITGGMMQLLMNNPYLAA 596
Query: 384 R 386
+
Sbjct: 597 Q 597
>AY049721-1|AAL06645.1| 2696|Homo sapiens androgen receptor associated
coregulator 267-b protein.
Length = 2696
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +2
Query: 59 RCSLPYCALSYKSSCRQRIYPT--*NKGF 139
RC LP C Y C Q+ PT NKGF
Sbjct: 1605 RCLLPLCGKFYHEECVQKYPPTVMQNKGF 1633
>AK055187-1|BAB70868.1| 1059|Homo sapiens protein ( Homo sapiens
cDNA FLJ30625 fis, clone CTONG2001820, highly similar to
Mus musculus NSD1 protein mRNA. ).
Length = 1059
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +2
Query: 59 RCSLPYCALSYKSSCRQRIYPT--*NKGF 139
RC LP C Y C Q+ PT NKGF
Sbjct: 568 RCLLPLCGKFYHEECVQKYPPTVMQNKGF 596
>AF395588-1|AAL40694.1| 2696|Homo sapiens putative nuclear protein
NSD1 protein.
Length = 2696
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +2
Query: 59 RCSLPYCALSYKSSCRQRIYPT--*NKGF 139
RC LP C Y C Q+ PT NKGF
Sbjct: 1605 RCLLPLCGKFYHEECVQKYPPTVMQNKGF 1633
>AF380302-1|AAL27991.1| 2427|Homo sapiens androgen receptor-associated
coregulator 267-a protein.
Length = 2427
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +2
Query: 59 RCSLPYCALSYKSSCRQRIYPT--*NKGF 139
RC LP C Y C Q+ PT NKGF
Sbjct: 1336 RCLLPLCGKFYHEECVQKYPPTVMQNKGF 1364
>AF322907-1|AAK92049.1| 2596|Homo sapiens NSD1 protein.
Length = 2596
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +2
Query: 59 RCSLPYCALSYKSSCRQRIYPT--*NKGF 139
RC LP C Y C Q+ PT NKGF
Sbjct: 1502 RCLLPLCGKFYHEECVQKYPPTVMQNKGF 1530
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,263,446
Number of Sequences: 237096
Number of extensions: 1071322
Number of successful extensions: 2518
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2503
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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