Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N09
         (216 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058723-1|AAL13952.1|  858|Drosophila melanogaster LD46494p pro...    28   1.5  
AE014134-751|AAF51002.1|  858|Drosophila melanogaster CG17840-PA...    28   1.5  
AJ009736-3|CAA08808.1|  510|Drosophila melanogaster envelope pro...    27   3.6  

>AY058723-1|AAL13952.1|  858|Drosophila melanogaster LD46494p
           protein.
          Length = 858

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/38 (36%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
 Frame = +3

Query: 39  SKVISNWINYTQMPSVYTFSRSD-NEILQELLRVFSSG 149
           SK I++W+ + ++ +   +S +D N++++EL RV SSG
Sbjct: 592 SKAITDWVRH-KVRACLPYSCADSNKLVKELFRVHSSG 628


>AE014134-751|AAF51002.1|  858|Drosophila melanogaster CG17840-PA
           protein.
          Length = 858

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 14/38 (36%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
 Frame = +3

Query: 39  SKVISNWINYTQMPSVYTFSRSD-NEILQELLRVFSSG 149
           SK I++W+ + ++ +   +S +D N++++EL RV SSG
Sbjct: 592 SKAITDWVRH-KVRACLPYSCADSNKLVKELFRVHSSG 628


>AJ009736-3|CAA08808.1|  510|Drosophila melanogaster envelope
           protein protein.
          Length = 510

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 13/61 (21%), Positives = 31/61 (50%)
 Frame = -2

Query: 215 VPTARIN*DCSLNRPLLSGGSTTRTKHTQQLLKNLIITS*ERVYRRHLCVIDPITYYFTI 36
           +P   +N DC+ N+ L+SG +  + K+    +   +I++    + + + + + +T    I
Sbjct: 370 IPETAVNQDCTHNKILISGNNIIKIKNCTIQIDEFLISNNLADFTQTIYITNNVTRLEPI 429

Query: 35  N 33
           N
Sbjct: 430 N 430


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,509,704
Number of Sequences: 53049
Number of extensions: 145937
Number of successful extensions: 268
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 24,988,368
effective HSP length: 51
effective length of database: 22,282,869
effective search space used: 445657380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)