Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N08
         (249 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    21   6.7  
AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    21   8.8  
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    21   8.8  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +1

Query: 1   ARGVCIVDDFKSN*SNVLKKHINNKILR 84
           +R +C++D        V+   +NN I R
Sbjct: 479 SRPICLIDGVAKGLERVILHRLNNHIER 506


>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 236 QNFFVLKLFVQHITTL 189
           Q F +LK+F QH  TL
Sbjct: 404 QTFELLKVFGQHAGTL 419


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 236 QNFFVLKLFVQHITTL 189
           Q F +LK+F QH  TL
Sbjct: 404 QTFELLKVFGQHAGTL 419


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,538
Number of Sequences: 2352
Number of extensions: 3286
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12740367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)