Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N08
         (249 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069489-1|AAL39634.1|  973|Drosophila melanogaster LD21888p pro...    27   4.6  
AE014296-1931|AAF50078.1|  973|Drosophila melanogaster CG6190-PA...    27   4.6  

>AY069489-1|AAL39634.1|  973|Drosophila melanogaster LD21888p
           protein.
          Length = 973

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 16/49 (32%), Positives = 29/49 (59%)
 Frame = -2

Query: 158 FRKN*KLITVKSKSAKKIV*FIFIPRNILLFICFFRTFD*LLLKSSTIH 12
           FRK  +++T   +S  K+   +F P  I + +C  R FD + L++ST++
Sbjct: 831 FRKGFEMVT--DESPLKL---LFRPEEIEMLVCGSREFDFVELENSTVY 874


>AE014296-1931|AAF50078.1|  973|Drosophila melanogaster CG6190-PA
           protein.
          Length = 973

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 16/49 (32%), Positives = 29/49 (59%)
 Frame = -2

Query: 158 FRKN*KLITVKSKSAKKIV*FIFIPRNILLFICFFRTFD*LLLKSSTIH 12
           FRK  +++T   +S  K+   +F P  I + +C  R FD + L++ST++
Sbjct: 831 FRKGFEMVT--DESPLKL---LFRPEEIEMLVCGSREFDFVELENSTVY 874


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,070,489
Number of Sequences: 53049
Number of extensions: 128904
Number of successful extensions: 249
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 24,988,368
effective HSP length: 62
effective length of database: 21,699,330
effective search space used: 433986600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)