Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N07
         (242 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   1.6  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   2.2  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    20   3.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   3.8  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    20   5.0  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    19   8.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    19   8.8  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    19   8.8  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    19   8.8  

>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 121 SLKQLLDGCGVTDECRGHLEA 59
           S+KQL+  C    E   HL+A
Sbjct: 96  SVKQLVSDCSTISEENPHLKA 116


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 84  SVTPQPSRSCLREYQSSS 137
           S  PQP RS    Y SSS
Sbjct: 54  SSVPQPPRSLEGSYDSSS 71


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 119 RISEQFSAMFRRKAFLHWYTG 181
           R+ E+ S++       HWY G
Sbjct: 179 RLIEESSSVMEAAYSCHWYDG 199


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 189 WTRFCSTRRR 218
           +T+FCST +R
Sbjct: 450 YTKFCSTEKR 459


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 20  NNVKTAVCDIPPKGLKMSST 79
           NNVK  +  I P G+   +T
Sbjct: 115 NNVKDVLVSIDPSGMVRLNT 134


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 34  GLYVIRDPFIV 2
           GLY  R PF++
Sbjct: 74  GLYATRSPFLL 84


>AF388659-1|AAK71995.1|  782|Apis mellifera
          1D-myo-inositol-trisphosphate 3-kinaseisoform A
          protein.
          Length = 782

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 52 RDVTHGGLY 26
          R + HGGLY
Sbjct: 8  RGIEHGGLY 16


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -2

Query: 79  CRGHLEAFRRDVTHGGLY 26
           C G    FRR +T   +Y
Sbjct: 204 CEGCKGFFRRSITKNAVY 221


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
          protein.
          Length = 72

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -2

Query: 79 CRGHLEAFRRDVTHGGLY 26
          C G    FRR +T   +Y
Sbjct: 1  CEGCKGFFRRSITKNAVY 18


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,467
Number of Sequences: 438
Number of extensions: 1470
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4149981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)