Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_N04
(300 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 109 9e-26
SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomy... 107 3e-25
SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|... 106 8e-25
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 25 2.4
SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces pombe... 25 2.4
SPCC24B10.09 |rps1702|rps17-2, rps17|40S ribosomal protein S17|S... 25 2.4
SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual 25 3.1
SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces pombe... 24 5.5
SPBC25B2.11 |pof2||F-box protein Pof2|Schizosaccharomyces pombe|... 24 5.5
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 24 5.5
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 24 5.5
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 23 7.3
SPBC887.01 |||acireductone dioxygenase family|Schizosaccharomyce... 23 7.3
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar... 23 7.3
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 23 7.3
SPCC364.05 |vps3||GTPase regulator Vps3 |Schizosaccharomyces pom... 23 7.3
SPBC2D10.07c |||mitochondrial inner membrane peptidase complex c... 23 7.3
SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces pombe... 23 7.3
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 23 9.6
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 23 9.6
SPBC776.04 |sec2302|sec23-b|GTPase activating protein Sec23b |Sc... 23 9.6
SPAC16E8.15 |tif45|tif1|translation initiation factor eIF4E, 4F ... 23 9.6
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 109 bits (262), Expect = 9e-26
Identities = 57/99 (57%), Positives = 67/99 (67%)
Frame = +2
Query: 2 ASIKKRKEIFKRAEQYVKEYRIKERDEIRLARQARNLVAIIMWAGEAKLAFVIRIRGVNQ 181
A K RKE FKRAE ++ YR +ER+ IRL R A+N I + E KL FVIRI GV
Sbjct: 42 AQKKNRKETFKRAETFINNYRQRERERIRLNRSAKNKGDIFV-PDETKLLFVIRIAGVKN 100
Query: 182 VSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPY 298
+ PK+RKVL+L RL +INN VFVR NKA MLRI EPY
Sbjct: 101 MPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPY 139
>SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 107 bits (258), Expect = 3e-25
Identities = 56/99 (56%), Positives = 68/99 (68%)
Frame = +2
Query: 2 ASIKKRKEIFKRAEQYVKEYRIKERDEIRLARQARNLVAIIMWAGEAKLAFVIRIRGVNQ 181
A KKR+ I KRAE Y EYR ER++I L R+AR + E KL FVIRIRG+N
Sbjct: 44 AQQKKRELIAKRAESYDAEYRKAEREQIELGRKARAEGNYYV-PDETKLVFVIRIRGINN 102
Query: 182 VSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPY 298
+ PK RK++QL RL QINNGVFV+ NKAT ML++ EPY
Sbjct: 103 IPPKARKIMQLLRLIQINNGVFVKFNKATKEMLQVVEPY 141
>SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 106 bits (254), Expect = 8e-25
Identities = 53/96 (55%), Positives = 67/96 (69%)
Frame = +2
Query: 11 KKRKEIFKRAEQYVKEYRIKERDEIRLARQARNLVAIIMWAGEAKLAFVIRIRGVNQVSP 190
KKR+ I KRAE Y EYR ER++I LAR+AR + E KL FV+RIRG+N + P
Sbjct: 46 KKRELIAKRAEAYEAEYRAAEREQIELARKARAEGNYFV-PHEPKLIFVVRIRGINNIPP 104
Query: 191 KVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPY 298
K RK++QL RL QINNG+FV+ NKA ML++ EPY
Sbjct: 105 KARKIMQLLRLLQINNGIFVKFNKAIKEMLQVVEPY 140
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 25.0 bits (52), Expect = 2.4
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +3
Query: 114 WQLLCGPVKLN*HLSSVFVVSTKYHPRYA----RYCSCSGCVRSTTACSFVST 260
W L G ++ + SVF +S HP +A R C +R ++ST
Sbjct: 34 WTLQTGSIRESAQPCSVFSISLSTHPEWAELADRACETMKTLRHPCIIKYLST 86
>SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 25.0 bits (52), Expect = 2.4
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = -1
Query: 162 RMTNASLASPAHIIIATRLRACLANLISSRSLMRYSLTYCSALLKISFLFL 10
++ +++L H +I + +L+S +SL T+C+++L +SF L
Sbjct: 239 KVEHSALLYLEHQLILYDTLTFVVHLLSQKSLPYSLTTFCASILVLSFFQL 289
>SPCC24B10.09 |rps1702|rps17-2, rps17|40S ribosomal protein
S17|Schizosaccharomyces pombe|chr 3|||Manual
Length = 132
Score = 25.0 bits (52), Expect = 2.4
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +2
Query: 5 SIKKRKEIFKRAEQYVKEYRIKERDEIRLARQARNLV 115
S K ++E +R +QYV E E+D+I + + ++++
Sbjct: 70 SFKLQEEERERKDQYVPEVSELEKDKINVDQDTKDML 106
>SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual
Length = 324
Score = 24.6 bits (51), Expect = 3.1
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +3
Query: 114 WQLLCGPVKLN*HLSSVFVVSTKYHPRYARYCSCS 218
W L+ + ++ HLSSV + ++ + Y SC+
Sbjct: 73 WSLVADSLPVSQHLSSVVIFASVFVSIYRNQLSCA 107
>SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 580
Score = 23.8 bits (49), Expect = 5.5
Identities = 7/28 (25%), Positives = 16/28 (57%)
Frame = +2
Query: 119 IIMWAGEAKLAFVIRIRGVNQVSPKVRK 202
++ W G L ++ + G+ + SP++ K
Sbjct: 150 MVKWCGSISLESIVLVEGIVKKSPEIIK 177
>SPBC25B2.11 |pof2||F-box protein Pof2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 23.8 bits (49), Expect = 5.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 123 IIATRLRACLANLISSRSLMRYSLTYCSALLKISFLFLM 7
I T L L + SR+L R L+YC L S +LM
Sbjct: 365 ICLTDLSVILLSGSFSRNLERVHLSYCIGLTAKSVSYLM 403
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 23.8 bits (49), Expect = 5.5
Identities = 20/95 (21%), Positives = 42/95 (44%)
Frame = +2
Query: 2 ASIKKRKEIFKRAEQYVKEYRIKERDEIRLARQARNLVAIIMWAGEAKLAFVIRIRGVNQ 181
A + ++ + ++ E + R++E R A + R I KLA ++ +G +
Sbjct: 583 AELAAQRALKQKQESEAESLRVQEEINKRNAERIRREKEAIRINEAKKLAEELKAKGGLE 642
Query: 182 VSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRI 286
V+ + + L +LR + + NK+ LR+
Sbjct: 643 VNAEDLEHLDADKLRAMQIEQVEKQNKSMNERLRV 677
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 125 MWAGEAKLAFVIRIRGVNQVSPKVRKVLQLFRL 223
M+ G +AFV I GV + SP++ LQL ++
Sbjct: 1138 MYYGLLGIAFVA-IAGVTEFSPELNAKLQLVKM 1169
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 23.4 bits (48), Expect = 7.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 201 RYCSCSGCVRSTTAC 245
RY SCSG V AC
Sbjct: 280 RYTSCSGIVNDLEAC 294
>SPBC887.01 |||acireductone dioxygenase family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 178
Score = 23.4 bits (48), Expect = 7.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 38 AEQYVKEYRIKERDEIRLARQ 100
A+ +KEY K RDE+ ++R+
Sbjct: 45 ADGLMKEYGFKNRDEVVVSRK 65
>SPAC6C3.06c |||P-type ATPase, calcium
transporting|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1033
Score = 23.4 bits (48), Expect = 7.3
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 113 VAIIMWAGEAKLAFVIRIRGVNQVSPKVRKVLQLF 217
VAI+ W L R R ++ V K+L +F
Sbjct: 492 VAIVKWTSTLGLVLTNRTRDAITLNNNVYKILNIF 526
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 23.4 bits (48), Expect = 7.3
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +3
Query: 138 KLN*HLSSVFVVSTKYHPRYARYCSCSGCVRSTTACS 248
K++ +LS+ K P Y +C+C T+ S
Sbjct: 7 KVSKNLSNTSAFLVKSKPLYISFCTCKAYFEDNTSLS 43
>SPCC364.05 |vps3||GTPase regulator Vps3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 910
Score = 23.4 bits (48), Expect = 7.3
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +2
Query: 2 ASIKKRKEIFKRAEQYVKEYRI---KERDEIRLARQARN 109
A++ K E+F+ +QY + I KE I L R +N
Sbjct: 452 ANVLKSNELFRDTDQYTQRQMIEITKENAYIMLMRYLKN 490
>SPBC2D10.07c |||mitochondrial inner membrane peptidase complex
catalytic subunit|Schizosaccharomyces pombe|chr
2|||Manual
Length = 157
Score = 23.4 bits (48), Expect = 7.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 165 FVVSTKYHPRYARYCSCSGCVRS 233
FV+ K H R+AR CS V S
Sbjct: 46 FVLLDKLHGRFARSCSVGDVVVS 68
>SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 719
Score = 23.4 bits (48), Expect = 7.3
Identities = 11/48 (22%), Positives = 25/48 (52%)
Frame = +2
Query: 53 KEYRIKERDEIRLARQARNLVAIIMWAGEAKLAFVIRIRGVNQVSPKV 196
+EY E + + R+L +W+G+A+ +++ ++ +PKV
Sbjct: 189 REYSASELSGVWAVKMVRDLWKRNVWSGDARAVNIMKSAALSS-NPKV 235
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 23.0 bits (47), Expect = 9.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 122 IMWAGEAKLAFVIRIRG 172
+ WAG KL FV +RG
Sbjct: 376 VAWAGNEKLMFVEVLRG 392
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 23.0 bits (47), Expect = 9.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 121 NCHEVTSLSCQSDFITLLDAVFFDILFGSLKDFFPLLNG 5
N + ++C+ TL+DA F +IL K + L NG
Sbjct: 63 NQDKYAEIACKDTGKTLVDAAFGEILVTLEKINWTLANG 101
>SPBC776.04 |sec2302|sec23-b|GTPase activating protein Sec23b
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 765
Score = 23.0 bits (47), Expect = 9.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 145 FSFTGPHNNCHEVTSLSCQSDFITLLDAVFFDILF 41
+SF P + S+S + D I LLD F ++F
Sbjct: 625 YSFNEPEGVPVLLDSVSIKPDVILLLDTYFHILIF 659
>SPAC16E8.15 |tif45|tif1|translation initiation factor eIF4E, 4F
complex subunit |Schizosaccharomyces pombe|chr
1|||Manual
Length = 218
Score = 23.0 bits (47), Expect = 9.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 139 FTGPHNNCHEVTSLSCQSDF 80
F G HNN + +SL +SD+
Sbjct: 74 FWGIHNNINPASSLPIKSDY 93
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,162,305
Number of Sequences: 5004
Number of extensions: 20056
Number of successful extensions: 85
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 73700136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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