Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N04
         (300 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   3.3  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   3.3  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    21   7.6  
AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...    21   7.6  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 207 CSCSGCVRSTTACSFVSTRPQ*TCFVSLSPI 299
           C C G            TRP  +CFVS+  +
Sbjct: 74  CYCEGHCPGNLQNGTCETRPGGSCFVSVEAV 104


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 209 AIPCVPWVILG 177
           A+ C+PW++LG
Sbjct: 649 ALLCIPWMLLG 659


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 45  NMSKNTASRS--VMKSDWQDRLVTSWQLLCGP 134
           N S N   RS    +SD   +++T  QLL GP
Sbjct: 545 NSSGNYMCRSNPPAQSDHNGKIITYHQLLSGP 576


>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +2

Query: 5   SIKKRKEIFKRAEQYVKEYRIKERDEIRLARQARNLV 115
           SIK ++E  +R + YV +    E+D I +  + + ++
Sbjct: 70  SIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEML 106


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 299,867
Number of Sequences: 2352
Number of extensions: 5525
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)