Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_N04
(300 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 122 1e-28
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 122 1e-28
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 122 1e-28
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 49 1e-06
AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p pro... 36 0.007
BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p pro... 34 0.029
BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p pro... 34 0.029
BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p pro... 34 0.029
AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA... 34 0.029
AE014297-4130|AAF56715.1| 448|Drosophila melanogaster CG13972-P... 30 0.47
BT003569-1|AAO39573.1| 745|Drosophila melanogaster LD44990p pro... 29 1.1
AE014298-1796|AAF48189.3| 1470|Drosophila melanogaster CG17762-P... 29 1.1
AE014298-1795|AAF48187.3| 1470|Drosophila melanogaster CG17762-P... 29 1.1
AE014298-1794|AAF48188.3| 1173|Drosophila melanogaster CG17762-P... 29 1.1
AE014298-1793|AAF48190.3| 1173|Drosophila melanogaster CG17762-P... 29 1.1
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 27 5.8
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 122 bits (293), Expect = 1e-28
Identities = 62/95 (65%), Positives = 76/95 (80%)
Frame = +2
Query: 14 KRKEIFKRAEQYVKEYRIKERDEIRLARQARNLVAIIMWAGEAKLAFVIRIRGVNQVSPK 193
++KE RAE+Y EY E+ EI+L R A+ + A EAKLAFV+RIRG+N+V+PK
Sbjct: 36 RKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPA-EAKLAFVVRIRGINKVAPK 94
Query: 194 VRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPY 298
VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPY
Sbjct: 95 VRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPY 129
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 122 bits (293), Expect = 1e-28
Identities = 62/95 (65%), Positives = 76/95 (80%)
Frame = +2
Query: 14 KRKEIFKRAEQYVKEYRIKERDEIRLARQARNLVAIIMWAGEAKLAFVIRIRGVNQVSPK 193
++KE RAE+Y EY E+ EI+L R A+ + A EAKLAFV+RIRG+N+V+PK
Sbjct: 49 RKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPA-EAKLAFVVRIRGINKVAPK 107
Query: 194 VRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPY 298
VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPY
Sbjct: 108 VRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPY 142
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 122 bits (293), Expect = 1e-28
Identities = 62/95 (65%), Positives = 76/95 (80%)
Frame = +2
Query: 14 KRKEIFKRAEQYVKEYRIKERDEIRLARQARNLVAIIMWAGEAKLAFVIRIRGVNQVSPK 193
++KE RAE+Y EY E+ EI+L R A+ + A EAKLAFV+RIRG+N+V+PK
Sbjct: 49 RKKENLVRAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPA-EAKLAFVVRIRGINKVAPK 107
Query: 194 VRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPY 298
VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPY
Sbjct: 108 VRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPY 142
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 49.2 bits (112), Expect = 1e-06
Identities = 26/56 (46%), Positives = 31/56 (55%)
Frame = -3
Query: 298 IGLSDTKHVHCGLVETNEHAVVDLTQPEXXXXXXXXXXXLVDTTNTDDKC*FSFTG 131
+GL D +HV GLV+ +EH VVDL Q E LVDT +TDDK F G
Sbjct: 55 VGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLGSHLVDTADTDDKGQFGLGG 110
>AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p
protein.
Length = 257
Score = 36.3 bits (80), Expect = 0.007
Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Frame = +2
Query: 14 KRKEIFKRAEQYVKEYRIKERDEIRLARQARNLVAIIMWAGEA-----KLAFVIRIRGVN 178
K F+RAE +V Y ER R+ + A A KL FV+R+ G
Sbjct: 48 KNHHKFRRAESFVMGYLKAERTSKRIKQTILRTNVTEQSAKAADDSNPKLLFVMRLAGKK 107
Query: 179 QVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPY 298
+ + R+ +N VF+ K +LR+ EP+
Sbjct: 108 IFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPF 147
>BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p
protein.
Length = 257
Score = 34.3 bits (75), Expect = 0.029
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Frame = +2
Query: 14 KRKEIFKRAEQYVKEYRIKERDEIRLARQARNLVAIIMWAGEA-----KLAFVIRIRGVN 178
K F+RAE +V Y ER R+ + A A KL FV+R G
Sbjct: 48 KNHHKFRRAESFVMGYLKAERTSKRIKQTILRTNVTEQSAKAADDSNPKLLFVMRHAGKK 107
Query: 179 QVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPY 298
+ + R+ +N VF+ K +LR+ EP+
Sbjct: 108 IFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPF 147
>BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p
protein.
Length = 257
Score = 34.3 bits (75), Expect = 0.029
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Frame = +2
Query: 14 KRKEIFKRAEQYVKEYRIKERDEIRLARQARNLVAIIMWAGEA-----KLAFVIRIRGVN 178
K F+RAE +V Y ER R+ + A A KL FV+R G
Sbjct: 48 KNHHKFRRAESFVMGYLKAERTSKRIKQTILRTNVTEQSAKAADDSNPKLLFVMRHAGKK 107
Query: 179 QVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPY 298
+ + R+ +N VF+ K +LR+ EP+
Sbjct: 108 IFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPF 147
>BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p
protein.
Length = 257
Score = 34.3 bits (75), Expect = 0.029
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Frame = +2
Query: 14 KRKEIFKRAEQYVKEYRIKERDEIRLARQARNLVAIIMWAGEA-----KLAFVIRIRGVN 178
K F+RAE +V Y ER R+ + A A KL FV+R G
Sbjct: 48 KNHHKFRRAESFVMGYLKAERTSKRIKQTILRTNVTEQSAKAADDSNPKLLFVMRHAGKK 107
Query: 179 QVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPY 298
+ + R+ +N VF+ K +LR+ EP+
Sbjct: 108 IFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPF 147
>AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA
protein.
Length = 257
Score = 34.3 bits (75), Expect = 0.029
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Frame = +2
Query: 14 KRKEIFKRAEQYVKEYRIKERDEIRLARQARNLVAIIMWAGEA-----KLAFVIRIRGVN 178
K F+RAE +V Y ER R+ + A A KL FV+R G
Sbjct: 48 KNHHKFRRAESFVMGYLKAERTSKRIKQTILRTNVTEQSAKAADDSNPKLLFVMRHAGKK 107
Query: 179 QVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPY 298
+ + R+ +N VF+ K +LR+ EP+
Sbjct: 108 IFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPF 147
>AE014297-4130|AAF56715.1| 448|Drosophila melanogaster CG13972-PA
protein.
Length = 448
Score = 30.3 bits (65), Expect = 0.47
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 8 IKKRKEIFKRAEQYVKEYRIKERDEIRL 91
++K KEI++ YV+EYR ++ +E RL
Sbjct: 377 LQKHKEIYEERMTYVQEYRAQKEEEQRL 404
>BT003569-1|AAO39573.1| 745|Drosophila melanogaster LD44990p
protein.
Length = 745
Score = 29.1 bits (62), Expect = 1.1
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -1
Query: 168 RIRMTNASLASPAHIIIATRLRACLANLISSRSLMRYSLTYCSALLKISFLFLME 4
RI+++ A A I + +CLA +S+ LM +SL LL FL LME
Sbjct: 503 RIQLSEMDFAVKAETI-TMKDGSCLATYLSNGHLMVHSLPSLKLLLDTDFLPLME 556
>AE014298-1796|AAF48189.3| 1470|Drosophila melanogaster CG17762-PD,
isoform D protein.
Length = 1470
Score = 29.1 bits (62), Expect = 1.1
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -1
Query: 168 RIRMTNASLASPAHIIIATRLRACLANLISSRSLMRYSLTYCSALLKISFLFLME 4
RI+++ A A I + +CLA +S+ LM +SL LL FL LME
Sbjct: 1228 RIQLSEMDFAVKAETI-TMKDGSCLATYLSNGHLMVHSLPSLKLLLDTDFLPLME 1281
>AE014298-1795|AAF48187.3| 1470|Drosophila melanogaster CG17762-PC,
isoform C protein.
Length = 1470
Score = 29.1 bits (62), Expect = 1.1
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -1
Query: 168 RIRMTNASLASPAHIIIATRLRACLANLISSRSLMRYSLTYCSALLKISFLFLME 4
RI+++ A A I + +CLA +S+ LM +SL LL FL LME
Sbjct: 1228 RIQLSEMDFAVKAETI-TMKDGSCLATYLSNGHLMVHSLPSLKLLLDTDFLPLME 1281
>AE014298-1794|AAF48188.3| 1173|Drosophila melanogaster CG17762-PB,
isoform B protein.
Length = 1173
Score = 29.1 bits (62), Expect = 1.1
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -1
Query: 168 RIRMTNASLASPAHIIIATRLRACLANLISSRSLMRYSLTYCSALLKISFLFLME 4
RI+++ A A I + +CLA +S+ LM +SL LL FL LME
Sbjct: 931 RIQLSEMDFAVKAETI-TMKDGSCLATYLSNGHLMVHSLPSLKLLLDTDFLPLME 984
>AE014298-1793|AAF48190.3| 1173|Drosophila melanogaster CG17762-PA,
isoform A protein.
Length = 1173
Score = 29.1 bits (62), Expect = 1.1
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -1
Query: 168 RIRMTNASLASPAHIIIATRLRACLANLISSRSLMRYSLTYCSALLKISFLFLME 4
RI+++ A A I + +CLA +S+ LM +SL LL FL LME
Sbjct: 931 RIQLSEMDFAVKAETI-TMKDGSCLATYLSNGHLMVHSLPSLKLLLDTDFLPLME 984
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 26.6 bits (56), Expect = 5.8
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +2
Query: 11 KKRKEIFKRAEQYVKEYRIKERDEIRLARQARNLV 115
K++ + ++ Y+K YR+ + + +ARQ + L+
Sbjct: 59 KQKLRLGEKTPVYIKNYRMADSQKPEIARQVKKLI 93
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,655,185
Number of Sequences: 53049
Number of extensions: 220542
Number of successful extensions: 686
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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