Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N04
         (300 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   1.9  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    20   5.7  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    20   5.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    20   5.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    20   7.6  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +3

Query: 168 VVSTKYHPRYARYCSCSGCVRSTTACSFVSTR 263
           V+S KY   +   C CS    S T     S R
Sbjct: 318 VMSAKYRNAFKETCRCSPSNPSITRTGLSSVR 349


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 197 VPWVILG*HHE 165
           +PWVILG H E
Sbjct: 87  IPWVILG-HSE 96


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +3

Query: 87  DWQDRLVTSWQLLCGPVKLN*HLSSVFVVSTKYHPRYARYCSCSGCVRSTT 239
           D  D      Q+   PVK+   + S  VV+     R  RYC     V  T+
Sbjct: 492 DMMDLAADEVQIDGEPVKITIGIHSGEVVTGVIGHRMPRYCLFGNTVNLTS 542


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +3

Query: 87  DWQDRLVTSWQLLCGPVKLN*HLSSVFVVSTKYHPRYARYCSCSGCVRSTT 239
           D  D      Q+   PVK+   + S  VV+     R  RYC     V  T+
Sbjct: 492 DMMDLAADEVQIDGEPVKITIGIHSGEVVTGVIGHRMPRYCLFGNTVNLTS 542


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 59  YRIKERDEIRL 91
           YR+KER EI +
Sbjct: 574 YRVKERGEIEV 584


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,130
Number of Sequences: 438
Number of extensions: 1413
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6244050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)