Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0024_N03
         (187 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   1.0  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    19   5.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    19   7.2  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    19   7.2  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    18   9.5  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    18   9.5  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    18   9.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    18   9.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 104 IIHKTKIISLLSVTCFKY 157
           I+ KT +  L  V C+KY
Sbjct: 309 ILQKTTLNMLTQVECYKY 326


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 67  ISNKNWL*TILGYYPQN*NHKFVK 138
           I    W+ + +GYY  N  H   K
Sbjct: 61  IFGTRWIFSCIGYYKLNKIHDAYK 84


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -1

Query: 55  STYIKPNDWIY 23
           STY   N W+Y
Sbjct: 288 STYDDINQWVY 298


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 122 IISLLSVTCFKYLLP 166
           +  LLSV  +KY+ P
Sbjct: 303 LAGLLSVLGYKYITP 317


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 45  IYVDIXLYFEQKLAL 89
           IY++   Y +QKL L
Sbjct: 132 IYIESFSYHKQKLRL 146


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 54  DIXLYFEQKLALNDSRILSTKL 119
           +I LY+   LAL+   ++ T L
Sbjct: 314 NILLYYRDSLALSVFALILTAL 335


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 50  RRYXSLFRTKTGFKRF*DIIHKTKIISLLSVTC 148
           R+Y    + ++  +R  +   + KIIS LS +C
Sbjct: 279 RKYRETSKERSRDRRERERSKEPKIISSLSNSC 311


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 147 HVTLNKLMIL 118
           H TL K MIL
Sbjct: 445 HATLEKFMIL 454


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,646
Number of Sequences: 438
Number of extensions: 674
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 41
effective length of database: 128,385
effective search space used:  2567700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)