Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0024_N02
(275 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1339 + 32760424-32760584,32762428-32764462 48 1e-06
08_01_0471 - 4147170-4149207,4150535-4150692 46 3e-06
02_05_0737 - 31328473-31330513,31331015-31331184 41 1e-04
01_04_0018 + 15128174-15128316,15128445-15128544,15129573-151297... 38 0.002
01_05_0737 - 24780952-24781100,24781515-24783453 31 0.13
08_02_1210 + 25314569-25314596,25315271-25315455,25315539-253156... 29 0.40
06_03_0929 - 26028345-26028390,26028474-26028610,26028695-260288... 29 0.70
12_02_0022 - 12398938-12401015,12401119-12401182 28 1.2
12_02_0893 + 24077634-24078379,24079347-24080412,24080741-240808... 27 1.6
03_04_0197 + 18375497-18375943,18376666-18377052,18377166-183774... 27 1.6
04_03_1001 - 21609280-21610131 27 2.8
04_03_0306 + 14136338-14136686,14137408-14137442,14137701-141377... 27 2.8
03_01_0162 + 1319953-1320288,1320488-1320608,1320894-1320952 27 2.8
02_05_0600 - 30273080-30274692,30274709-30274949 26 3.7
10_08_0130 - 15032348-15033338,15033459-15033517 26 5.0
10_08_0123 - 14986083-14986193,14986830-14987027 26 5.0
08_02_0056 + 11751585-11751672,11751741-11752060,11755363-117554... 26 5.0
08_01_0319 + 2848751-2848762,2849516-2850449,2850476-2851234,285... 26 5.0
11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939... 25 6.5
09_04_0308 + 16567361-16568854,16568946-16569068,16569372-165696... 25 6.5
05_06_0212 + 26410330-26410419,26410562-26410846,26411005-264112... 25 6.5
02_03_0172 + 15965342-15965711,15967757-15967849,15967976-159680... 25 6.5
02_01_0617 + 4625564-4625887,4626824-4626944,4627643-4627833,462... 25 6.5
09_06_0111 - 20924838-20924969,20925147-20925290,20925391-209254... 25 8.7
08_02_0796 - 21300251-21300373,21300846-21301721 25 8.7
08_01_0961 - 9622444-9622928,9623011-9623102,9623862-9624002,962... 25 8.7
07_01_0936 + 7932772-7933324,7933550-7934414,7934714-7934786 25 8.7
05_03_0478 - 14526180-14526578 25 8.7
03_02_0627 + 9951391-9951523,9951615-9951684,9951829-9951856,995... 25 8.7
>04_04_1339 + 32760424-32760584,32762428-32764462
Length = 731
Score = 47.6 bits (108), Expect = 1e-06
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +3
Query: 9 YSLVARIPDGLCELRRLLEQHIHAQGLQAIDKCGEFAHTDPKVYVSTILEVHKKYNALVL 188
Y+L R+PDG +R ++ H+ G + + DP +V +L KY+ ++
Sbjct: 291 YNLFKRVPDGHSTIRSVMASHVKESGKALVSDPEKIK--DPVEFVQRLLNEKDKYDEIIS 348
Query: 189 VAFIYDSGFVAALDKACGRFINTN 260
++F D F AL+ + FIN N
Sbjct: 349 ISFSNDKAFQNALNSSFENFINLN 372
>08_01_0471 - 4147170-4149207,4150535-4150692
Length = 731
Score = 46.4 bits (105), Expect = 3e-06
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = +3
Query: 9 YSLVARIPDGLCELRRLLEQHIHAQGLQAIDKCGEFAHTDPKVYVSTILEVHKKYNALVL 188
YSL R+PDG ++ ++ H+ G + DP +V +L KY+++V
Sbjct: 290 YSLFQRVPDGHSTIKSVMNSHVKETGKDMVMDPERLK--DPVDFVQRLLNEKDKYDSIVT 347
Query: 189 VAFIYDSGFVAALDKACGRFINTN 260
+F D F AL+ + FIN N
Sbjct: 348 TSFSNDKSFQNALNSSFEHFINLN 371
>02_05_0737 - 31328473-31330513,31331015-31331184
Length = 736
Score = 41.1 bits (92), Expect = 1e-04
Identities = 25/84 (29%), Positives = 41/84 (48%)
Frame = +3
Query: 9 YSLVARIPDGLCELRRLLEQHIHAQGLQAIDKCGEFAHTDPKVYVSTILEVHKKYNALVL 188
Y+L R+ DGL +R ++ ++ G Q + DP +V +L K++ ++
Sbjct: 294 YNLFRRVFDGLSTIRDVMTSYLRETGKQLVTDPERLK--DPVEFVQRLLNEKDKHDKIIN 351
Query: 189 VAFIYDSGFVAALDKACGRFINTN 260
VAF D F AL+ + FIN N
Sbjct: 352 VAFGNDKTFQNALNSSFEYFINLN 375
>01_04_0018 +
15128174-15128316,15128445-15128544,15129573-15129758,
15129877-15129924,15130006-15130209,15130476-15130565,
15130667-15130747,15130827-15130889,15131794-15131832,
15131914-15132000,15132103-15132252,15132331-15132386,
15132493-15132775,15132989-15133132,15133233-15133451,
15133528-15133695,15133868-15133969
Length = 720
Score = 37.5 bits (83), Expect = 0.002
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Frame = +3
Query: 9 YSLVARIPDGLCELRRLLEQHIHAQGLQAIDKCGEFAHT--DPKV----------YVSTI 152
+ L +RI DGL + ++ ++H+ A+G+ + + A++ D K +V ++
Sbjct: 265 FRLFSRITDGLLPVSKIFKEHVIAEGMSLLKHATDAANSRKDEKKGVVVGLPEQDFVRSV 324
Query: 153 LEVHKKYNALVLVAFIYDSGFVAALDKACGRFINTNAV 266
+E+H KY A V F +S F AL +A N + V
Sbjct: 325 IELHDKYMAYVTNCFQSNSVFHKALKEAFEVICNKDVV 362
>01_05_0737 - 24780952-24781100,24781515-24783453
Length = 695
Score = 31.1 bits (67), Expect = 0.13
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = +3
Query: 60 LEQHIH------AQGLQAIDKCGEFAHTDPKVYVSTILEVHKKYNALVLVAFIYDSGF 215
+EQH+H A L+AID GE A +DP L + +KY+ +L +++ F
Sbjct: 107 VEQHLHNVLWCVAVALEAIDAAGEIAGSDPDELARGRLVLARKYDRDMLDPKLFEHAF 164
>08_02_1210 +
25314569-25314596,25315271-25315455,25315539-25315648,
25315756-25315909,25316213-25316237,25316566-25316756,
25316837-25316899,25317012-25317075,25318078-25318109
Length = 283
Score = 29.5 bits (63), Expect = 0.40
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3
Query: 270 SSPHSC**IVHTPYPGRRQNRSH 202
SS HS +VHTP P +RQ +SH
Sbjct: 119 SSHHSS--VVHTPVPAKRQKKSH 139
>06_03_0929 -
26028345-26028390,26028474-26028610,26028695-26028826,
26028901-26029109,26029554-26029674,26030730-26031080
Length = 331
Score = 28.7 bits (61), Expect = 0.70
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 39 LCELRRLLEQHIHAQGLQAIDKCGEFAHTDPKVYVSTI 152
LC + L+QH+ ++A+ C E T + V T+
Sbjct: 124 LCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTVVTL 161
>12_02_0022 - 12398938-12401015,12401119-12401182
Length = 713
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 142 CQQYWKCIRNTTLSFWSLSFMTPVLS 219
C + W C+RN LSF L+ T + S
Sbjct: 378 CSKKWHCLRNMVLSFRRLACSTGIWS 403
>12_02_0893 +
24077634-24078379,24079347-24080412,24080741-24080866,
24081278-24081384,24081720-24081744
Length = 689
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 48 LRRLLEQHIHAQGLQAIDKCGEFAHTDPKVYVSTILE 158
L +LLE + A+GL +C + ++ Y+S +L+
Sbjct: 502 LLKLLENKLQAEGLSLTQECADVLNSGLNAYLSRLLK 538
>03_04_0197 +
18375497-18375943,18376666-18377052,18377166-18377410,
18377651-18378221
Length = 549
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Frame = +1
Query: 1 ARGTASWLVYRTGCASCAGCWSSTYTRRGC---RRSTSAA 111
ARG W V A+ G W RR C RR SAA
Sbjct: 105 ARGWGRWGVESAAAAAALGGWGGARGRRACAPWRRRRSAA 144
>04_03_1001 - 21609280-21610131
Length = 283
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/42 (26%), Positives = 17/42 (40%)
Frame = +3
Query: 51 RRLLEQHIHAQGLQAIDKCGEFAHTDPKVYVSTILEVHKKYN 176
+ + H A G QA D CGE+ P H+ ++
Sbjct: 24 KECMRNHAAAMGGQAFDGCGEYMPASPDSLKCAACGCHRSFH 65
>04_03_0306 +
14136338-14136686,14137408-14137442,14137701-14137778,
14138046-14138124,14138731-14138823,14139472-14139556,
14140270-14140345,14140669-14140794,14141039-14141137,
14141238-14141339,14141561-14141671,14141809-14141904,
14142488-14142539,14142624-14142735,14142879-14142943,
14144124-14144521,14145236-14145330,14145989-14146015,
14146081-14146156,14146368-14146421,14146741-14146863,
14146955-14147023
Length = 799
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 94 RSTSAANSLTLIRRYTCQQYWKCIRNTTLSFWSLSFMTPVLSPPW 228
RST+ + + + Y QQ WK TT + W+ S T + P+
Sbjct: 254 RSTNKEDIVVPMIDYENQQGWKRKPRTTFADWNTSLQTIITWSPY 298
>03_01_0162 + 1319953-1320288,1320488-1320608,1320894-1320952
Length = 171
Score = 26.6 bits (56), Expect = 2.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 39 LCELRRLLEQHIHAQGLQAIDKCGE 113
LC R L+QH+ ++A+ C E
Sbjct: 119 LCSFREQLQQHVRVHAVEAVMACRE 143
>02_05_0600 - 30273080-30274692,30274709-30274949
Length = 617
Score = 26.2 bits (55), Expect = 3.7
Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Frame = +1
Query: 1 ARGTASWLVYRTGCASCAGCWSSTYTRRGCRR--STSAANSLTLIRRYTCQQYWKCIRNT 174
A A W G C CW+ST + G T A ++ R + C+R
Sbjct: 45 AFAAADWCFRLHGWPLCRRCWASTSSSTGLPSPPPTGLAYYAAVVGRLRLHRP-ACLRRR 103
Query: 175 TLSF--WSLSFMTPVL 216
L F L+FM P+L
Sbjct: 104 RLVFPPARLAFMPPLL 119
>10_08_0130 - 15032348-15033338,15033459-15033517
Length = 349
Score = 25.8 bits (54), Expect = 5.0
Identities = 23/90 (25%), Positives = 40/90 (44%)
Frame = +3
Query: 6 RYSLVARIPDGLCELRRLLEQHIHAQGLQAIDKCGEFAHTDPKVYVSTILEVHKKYNALV 185
++ + +P+ E + QH+ L A DK G H + V IL H N++
Sbjct: 214 KFIYIDMLPEMDQEDEAAMAQHL----LVAADKYG--LHRLKMICVE-ILSNHIDANSVA 266
Query: 186 LVAFIYDSGFVAALDKACGRFINTNAVTKA 275
+ + D L +AC F+N++A+ A
Sbjct: 267 TILVLADKHHCYGLREACFDFLNSSAILSA 296
>10_08_0123 - 14986083-14986193,14986830-14987027
Length = 102
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 132 KVYVSTILEVHKKYNALVLVAFIYDSGFVAALDKACGRFINTNAVTKA 275
K+ IL H N++ + + + + L +AC F+N+ AV A
Sbjct: 18 KMICLEILSSHIDANSVATILVLAEKHYCYGLKEACFEFLNSLAVLSA 65
>08_02_0056 +
11751585-11751672,11751741-11752060,11755363-11755483,
11755950-11756137,11756224-11756355,11756535-11756577,
11757298-11757395
Length = 329
Score = 25.8 bits (54), Expect = 5.0
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +3
Query: 39 LCELRRLLEQHIHAQGLQAIDKCGE 113
LC + L+QH+ ++A+ C E
Sbjct: 143 LCSFKEQLQQHVRVHAMEAVMACWE 167
>08_01_0319 +
2848751-2848762,2849516-2850449,2850476-2851234,
2851793-2851850,2851900-2852179
Length = 680
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 16 SWLVYRTGCASCAGCWSSTYTRRGCRRSTSAANSLTLIRRYTCQQYWKCI 165
+WL+ GC C G + C ST N L+ Y + K I
Sbjct: 251 AWLISIAGCLQCKGLLDQYWCMNLCDMSTDITN---LVHNYVKDGWTKYI 297
>11_04_0364 - 16791774-16792490,16792545-16793561,16793856-16793920,
16794787-16796964,16797065-16797322,16799815-16800172
Length = 1530
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 216 VAALDKACGRFINTNAVTK 272
V + DKAC FINT +TK
Sbjct: 1183 VVSEDKACSIFINTTDLTK 1201
>09_04_0308 +
16567361-16568854,16568946-16569068,16569372-16569649,
16570316-16571924,16572363-16573781
Length = 1640
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 216 VAALDKACGRFINTNAVTK 272
V + DKAC FINT +TK
Sbjct: 750 VVSEDKACSIFINTTDLTK 768
>05_06_0212 +
26410330-26410419,26410562-26410846,26411005-26411208,
26411636-26411692,26411859-26412926
Length = 567
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +3
Query: 63 EQHIHAQGLQAIDKCGEFAHTDPKVYVSTILEVHKKYNALV 185
E + + ++ +K E DP V + ++H + NALV
Sbjct: 404 EPEVPSYQVETEEKVAELTVADPTVETMPLQDIHNEENALV 444
>02_03_0172 +
15965342-15965711,15967757-15967849,15967976-15968060,
15968749-15968824,15968992-15969120,15969473-15969571,
15969661-15969762,15970257-15970415,15970507-15970602,
15971497-15971647,15971782-15971893,15972004-15972074,
15972548-15972984,15973421-15973492,15973713-15973810,
15974350-15974425,15975512-15975634,15975776-15975844
Length = 805
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 145 QQYWKCIRNTTLSFWSLSFMTPVLSPPW 228
QQYWK + TT W S T + P+
Sbjct: 215 QQYWKRMMRTTSIDWQTSLATIIEWSPY 242
>02_01_0617 +
4625564-4625887,4626824-4626944,4627643-4627833,
4627910-4628041,4628132-4628269
Length = 301
Score = 25.4 bits (53), Expect = 6.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +3
Query: 39 LCELRRLLEQHIHAQGLQAIDKCGE 113
LC + L+QH+ ++A+ C E
Sbjct: 115 LCSFKEQLQQHVRVHAMEAVMGCWE 139
>09_06_0111 -
20924838-20924969,20925147-20925290,20925391-20925453,
20925993-20926116,20926779-20927005,20927088-20927255,
20927348-20927498,20927567-20927889
Length = 443
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 120 HTDPKVYV-STILEVHKKYNALVLVAFIYDSGFVAALDKAC 239
H +P V V S IL +KY + + ++D + LD+ C
Sbjct: 137 HNNPNVSVESVILPDGEKYKDMGTLMKVFDKAVESRLDRRC 177
>08_02_0796 - 21300251-21300373,21300846-21301721
Length = 332
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 51 RRLLEQHIHAQGLQAIDKCGEF 116
R L+ H + G A+D CGEF
Sbjct: 40 RECLKNHAASLGGHAVDGCGEF 61
>08_01_0961 -
9622444-9622928,9623011-9623102,9623862-9624002,
9624460-9624506,9624581-9624639,9624780-9624940,
9625021-9625196,9625284-9625355,9625820-9625879,
9625997-9626191
Length = 495
Score = 25.0 bits (52), Expect = 8.7
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 34 TGCA-SCAGCWSSTYTRRGCRRSTSAANSLTLIRRYTCQQYWKCIRNTTLSFWSLSFMTP 210
T C S GC T+ +A++S T IR R+T +SF L+ TP
Sbjct: 327 TECTVSAEGCGHEFCTKCALYLCATASSS-TSIRGVPGSIPCPLCRHTIVSFVRLTSTTP 385
Query: 211 VLSPPWIRR 237
+ PW +
Sbjct: 386 IKELPWTNK 394
>07_01_0936 + 7932772-7933324,7933550-7934414,7934714-7934786
Length = 496
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 22 LVYRTGCASCAGCW 63
LV RTG A+C GC+
Sbjct: 156 LVLRTGSAACLGCY 169
>05_03_0478 - 14526180-14526578
Length = 132
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +1
Query: 4 RGTASWLVYRTGCASCAGCWSSTYTR 81
RG W +GC S G W+ R
Sbjct: 36 RGDEGWQTIGSGCVSSGGSWARRQRR 61
>03_02_0627 +
9951391-9951523,9951615-9951684,9951829-9951856,
9952208-9952254,9952366-9952456,9952738-9952915,
9953626-9953713,9953788-9953869,9954195-9954270,
9954429-9954496,9954623-9954692,9955469-9955553,
9955671-9955764,9956289-9956372
Length = 397
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 172 TTLSFWSLSFMTPVLSPPWIRRVDD 246
T + F+S S+ + P WI+R+ D
Sbjct: 51 TLIEFYSTSYKSSAPLPGWIKRIRD 75
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,034,771
Number of Sequences: 37544
Number of extensions: 121278
Number of successful extensions: 434
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 268461864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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